RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ZSCAN25Q6NSZ9 544 aa23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 ANKLE1Q8NAG6 615 aa23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 PRO3102Q9H379 93 aa23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 FLRT1Q9NZU1 646 aa23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 OGDHLQ9ULD0 1010 aa23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 TMX2Q9Y320 296 aa23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 GREB1LQ9C091 1923 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1B-202ENST00000489921 LAMA3Q16787 3333 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 PTPREP23469 700 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CCNA1P78396 465 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 MAP2K5Q13163 448 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 COG2Q14746 738 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CHRDL2Q6WN34 429 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CCAR1Q8IX12 1150 aaKnown RBP23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 TRMT44Q8IYL2 757 aaKnown RBP23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 KBTBD3Q8NAB2 608 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 OSBP2Q969R2 916 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 APBA2Q99767 749 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 PCDH10Q9P2E7 1040 aa23.36■■□□□ 1.33
TNFRSF1B-202ENST00000489921 SLC15A5A6NIM6 579 aa23.35■■□□□ 1.33
TNFRSF1B-202ENST00000489921 IGHA2P01877 340 aa23.35■■□□□ 1.33
TNFRSF1B-202ENST00000489921 ZKSCAN1P17029 563 aaPredicted RBP23.35■■□□□ 1.33
TNFRSF1B-202ENST00000489921 LHX8Q68G74 356 aa23.35■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CCDC17Q96LX7 622 aa23.35■■□□□ 1.33
TNFRSF1B-202ENST00000489921 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.35■■□□□ 1.33
TNFRSF1B-202ENST00000489921 FRMPD3Q5JV73 1810 aa23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 GSG1L2A8MUP6 293 aa23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CCND3P30281 292 aaPredicted RBP23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 ICA1Q05084 483 aa23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 GRB14Q14449 540 aa23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 NECAB2Q7Z6G3 386 aa23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 HOXC10Q9NYD6 342 aa23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 RBM27Q9P2N5 1060 aaKnown RBP23.34■■□□□ 1.33
TNFRSF1B-202ENST00000489921 SBK1Q52WX2 424 aa23.33■■□□□ 1.33
TNFRSF1B-202ENST00000489921 NPLOC4Q8TAT6 608 aa23.33■■□□□ 1.33
TNFRSF1B-202ENST00000489921 LPAR1Q92633 364 aa23.33■■□□□ 1.33
TNFRSF1B-202ENST00000489921 MOV10L1Q9BXT6 1211 aaKnown RBP23.33■■□□□ 1.33
TNFRSF1B-202ENST00000489921 VCPKMTQ9H867 229 aa23.33■■□□□ 1.33
TNFRSF1B-202ENST00000489921 NR2E3Q9Y5X4 410 aa23.33■■□□□ 1.33
TNFRSF1B-202ENST00000489921 COL11A1P12107 1806 aaPredicted RBP23.33■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ZNF236Q9UL36 1845 aa23.33■■□□□ 1.32
TNFRSF1B-202ENST00000489921 EVI5O60447 810 aa23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 HOXC6P09630 235 aa23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 DSG3P32926 999 aa23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 SPICE1Q8N0Z3 855 aa23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 TANGO6Q9C0B7 1094 aa23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ARHGEF10LQ9HCE6 1279 aa23.32■■□□□ 1.32
TNFRSF1B-202ENST00000489921 RNF113AO15541 343 aaKnown RBP23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 GLRX3O76003 335 aaKnown RBP23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 EEF2P13639 858 aaKnown RBP23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 WDR78Q5VTH9 848 aa23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 PI4K2BQ8TCG2 481 aa23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 APPBP2Q92624 585 aa23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 NBPF3Q9H094 633 aa23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 SPATC1LQ9H0A9 340 aa23.31■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ZNFX1Q9P2E3 1918 aaKnown RBP23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 AMOTL1Q8IY63 956 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ATG4CQ96DT6 458 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 DDRGK1Q96HY6 314 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 GPATCH3Q96I76 525 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 EPB41L4AQ9HCS5 686 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ARPP21Q9UBL0 812 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ADAMTS5Q9UNA0 930 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 PFASO15067 1338 aa23.3■■□□□ 1.32
TNFRSF1B-202ENST00000489921 M0R2C6 588 aa23.29■■□□□ 1.32
TNFRSF1B-202ENST00000489921 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1B-202ENST00000489921 KANSL2Q9H9L4 492 aa23.29■■□□□ 1.32
TNFRSF1B-202ENST00000489921 CWC22Q9HCG8 908 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ROBO3Q96MS0 1386 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 WDR46O15213 610 aaKnown RBP23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 FLOT1O75955 427 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 COL6A1P12109 1028 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ERCC3P19447 782 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 RASA1P20936 1047 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 SHCBP1Q8NEM2 672 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 C11orf49Q9H6J7 331 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 SH2D4AQ9H788 454 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 IVNS1ABPQ9Y6Y0 642 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 TTC41PQ6P2S7 1318 aa23.28■■□□□ 1.32
TNFRSF1B-202ENST00000489921 GPAA1O43292 621 aa23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 COBLO75128 1261 aa23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 ZFYP08048 801 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 MB21D1Q8N884 522 aa23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 TRPV1Q8NER1 839 aa23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 FBXO28Q9NVF7 368 aa23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 SALL3Q9BXA9 1300 aa23.27■■□□□ 1.32
TNFRSF1B-202ENST00000489921 STRNO43815 780 aa23.26■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ADORA2AP29274 412 aa23.26■■□□□ 1.31
TNFRSF1B-202ENST00000489921 CYP2C19P33261 490 aa23.26■■□□□ 1.31
TNFRSF1B-202ENST00000489921 TMEM132BQ14DG7 1078 aa23.26■■□□□ 1.31
TNFRSF1B-202ENST00000489921 SEC62Q99442 399 aaKnown RBP23.26■■□□□ 1.31
TNFRSF1B-202ENST00000489921 MINDY4BA8MYZ0 360 aa23.25■■□□□ 1.31
TNFRSF1B-202ENST00000489921 ATP2B2Q01814 1243 aa23.25■■□□□ 1.31
TNFRSF1B-202ENST00000489921 MFSD14CQ5VZR4 134 aa23.25■■□□□ 1.31
TNFRSF1B-202ENST00000489921 STK11IPQ8N1F8 1099 aa23.25■■□□□ 1.31
TNFRSF1B-202ENST00000489921 MYH4Q9Y623 1939 aa23.24■■□□□ 1.31
TNFRSF1B-202ENST00000489921 IGKV6D-41A0A0C4DH26 115 aa23.24■■□□□ 1.31
TNFRSF1B-202ENST00000489921 PATL2C9JE40 543 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms