RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SHDQ96IW2 340 aa8.59□□□□□ -1.03
CCDC39-206ENST00000489868 ZNF512BQ96KM6 892 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-206ENST00000489868 ATP13A1Q9HD20 1204 aa8.59□□□□□ -1.03
CCDC39-206ENST00000489868 ATF4P18848 351 aaPredicted RBP8.58□□□□□ -1.04
CCDC39-206ENST00000489868 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
CCDC39-206ENST00000489868 SEC16BQ96JE7 1060 aa8.58□□□□□ -1.04
CCDC39-206ENST00000489868 FBXL18Q96ME1 805 aa8.58□□□□□ -1.04
CCDC39-206ENST00000489868 DUSP15Q9H1R2 295 aaPredicted RBP8.58□□□□□ -1.04
CCDC39-206ENST00000489868 SHISA3A0PJX4 238 aa8.57□□□□□ -1.04
CCDC39-206ENST00000489868 GIPRP48546 466 aa8.57□□□□□ -1.04
CCDC39-206ENST00000489868 NBPF12Q5TAG4 269 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-206ENST00000489868 TAB3Q8N5C8 712 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-206ENST00000489868 FAM169BQ8N8A8 192 aa8.57□□□□□ -1.04
CCDC39-206ENST00000489868 PIWIL2Q8TC59 973 aaKnown RBP8.57□□□□□ -1.04
CCDC39-206ENST00000489868 SLC6A18Q96N87 628 aa8.57□□□□□ -1.04
CCDC39-206ENST00000489868 ASPNQ9BXN1 380 aa8.57□□□□□ -1.04
CCDC39-206ENST00000489868 SRRTQ9BXP5 876 aaKnown RBP8.57□□□□□ -1.04
CCDC39-206ENST00000489868 SRFP11831 508 aa8.56□□□□□ -1.04
CCDC39-206ENST00000489868 CCNFP41002 786 aa8.56□□□□□ -1.04
CCDC39-206ENST00000489868 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
CCDC39-206ENST00000489868 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
CCDC39-206ENST00000489868 UBE2FQ969M7 185 aa8.56□□□□□ -1.04
CCDC39-206ENST00000489868 TM9SF2Q99805 663 aa8.56□□□□□ -1.04
CCDC39-206ENST00000489868 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCDC39-206ENST00000489868 ADAMTS6Q9UKP5 1117 aa8.56□□□□□ -1.04
CCDC39-206ENST00000489868 GUCY2CP25092 1073 aa8.55□□□□□ -1.04
CCDC39-206ENST00000489868 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
CCDC39-206ENST00000489868 SNW1Q13573 536 aaKnown RBP8.55□□□□□ -1.04
CCDC39-206ENST00000489868 PPFIBP1Q86W92 1011 aa8.55□□□□□ -1.04
CCDC39-206ENST00000489868 ASB11Q8WXH4 323 aa8.55□□□□□ -1.04
CCDC39-206ENST00000489868 PRDM7Q9NQW5 492 aa8.55□□□□□ -1.04
CCDC39-206ENST00000489868 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
CCDC39-206ENST00000489868 LTBP3Q9NS15 1303 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 C9IYK1 514 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 CLEC3AO75596 197 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 FUT4P22083 530 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 IKZF1Q13422 519 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 GAB4Q2WGN9 574 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 UNC5AQ6ZN44 842 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 GPR62Q9BZJ7 368 aa8.54□□□□□ -1.04
CCDC39-206ENST00000489868 THAP5Q7Z6K1 395 aa8.53□□□□□ -1.04
CCDC39-206ENST00000489868 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
CCDC39-206ENST00000489868 MBNL3Q9NUK0 354 aaKnown RBP8.53□□□□□ -1.04
CCDC39-206ENST00000489868 ADGRE2Q9UHX3 823 aa8.53□□□□□ -1.04
CCDC39-206ENST00000489868 KCNH3Q9ULD8 1083 aa8.53□□□□□ -1.04
CCDC39-206ENST00000489868 ESR1P03372 595 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 FGRP09769 529 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 RNF4P78317 190 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 PLCL1Q15111 1095 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 NBPF9Q3BBW0 867 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 ANGEL2Q5VTE6 544 aaKnown RBP8.52□□□□□ -1.05
CCDC39-206ENST00000489868 TDRD10Q5VZ19 366 aaKnown RBP8.52□□□□□ -1.05
CCDC39-206ENST00000489868 TMC3Q7Z5M5 1100 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 TTC6Q86TZ1 520 aa8.52□□□□□ -1.05
CCDC39-206ENST00000489868 SUCOQ9UBS9 1254 aaKnown RBP8.52□□□□□ -1.05
CCDC39-206ENST00000489868 A0A1W2PQH9 124 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 SHOXO15266 292 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 RNASE1P07998 156 aaKnown RBP8.51□□□□□ -1.05
CCDC39-206ENST00000489868 TPP2P29144 1249 aaPredicted RBP8.51□□□□□ -1.05
CCDC39-206ENST00000489868 ZP2Q05996 745 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 ZNF792Q3KQV3 632 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 CBLL1Q75N03 491 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 AGBL5Q8NDL9 886 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 CPLX3Q8WVH0 158 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 ANAPC16Q96DE5 110 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 CARS2Q9HA77 564 aaKnown RBP8.51□□□□□ -1.05
CCDC39-206ENST00000489868 MINPP1Q9UNW1 487 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 MRVI1Q9Y6F6 885 aa8.51□□□□□ -1.05
CCDC39-206ENST00000489868 PMS1P54277 932 aaKnown RBP8.5□□□□□ -1.05
CCDC39-206ENST00000489868 TSPYL5Q86VY4 417 aaPredicted RBP8.5□□□□□ -1.05
CCDC39-206ENST00000489868 MCF2L2Q86YR7 1114 aa8.5□□□□□ -1.05
CCDC39-206ENST00000489868 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
CCDC39-206ENST00000489868 FAM86C1Q9NVL1 165 aa8.5□□□□□ -1.05
CCDC39-206ENST00000489868 CHMP4BP1P59074 171 aa8.49□□□□□ -1.05
CCDC39-206ENST00000489868 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-206ENST00000489868 C19orf47Q8N9M1 422 aaKnown RBP8.49□□□□□ -1.05
CCDC39-206ENST00000489868 OR6P1Q8NGX9 317 aa8.49□□□□□ -1.05
CCDC39-206ENST00000489868 HDAC8Q9BY41 377 aa8.49□□□□□ -1.05
CCDC39-206ENST00000489868 MKRN2Q9H000 416 aaKnown RBP8.49□□□□□ -1.05
CCDC39-206ENST00000489868 ZNF214Q9UL59 606 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-206ENST00000489868 STRIP2Q9ULQ0 834 aa8.49□□□□□ -1.05
CCDC39-206ENST00000489868 PCDHB10Q9UN67 800 aa8.49□□□□□ -1.05
CCDC39-206ENST00000489868 DNAJA1P31689 397 aaKnown RBP8.48□□□□□ -1.05
CCDC39-206ENST00000489868 ARID5AQ03989 594 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 GNL2Q13823 731 aaKnown RBP8.48□□□□□ -1.05
CCDC39-206ENST00000489868 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-206ENST00000489868 DCAF15Q66K64 600 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 SLC43A3Q8NBI5 491 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 GMLQ99445 158 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC39-206ENST00000489868 TRIT1Q9H3H1 467 aaKnown RBP8.48□□□□□ -1.05
CCDC39-206ENST00000489868 GPATCH2Q9NW75 528 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 LMCD1Q9NZU5 365 aa8.48□□□□□ -1.05
CCDC39-206ENST00000489868 PRAMEF1O95521 474 aa8.47□□□□□ -1.05
CCDC39-206ENST00000489868 TP53P04637 393 aaPredicted RBP8.47□□□□□ -1.05
CCDC39-206ENST00000489868 ETFBP38117 255 aa8.47□□□□□ -1.05
CCDC39-206ENST00000489868 CASP7P55210 303 aa8.47□□□□□ -1.05
CCDC39-206ENST00000489868 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
CCDC39-206ENST00000489868 AUHQ13825 339 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms