RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 C12orf60Q5U649 245 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 CTR9Q6PD62 1173 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 GPR142Q7Z601 462 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 APPBP2Q92624 585 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 SNX21Q969T3 373 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 SHISA4Q96DD7 197 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 CCDC17Q96LX7 622 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 PORCNQ9H237 461 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 ARPP21Q9UBL0 812 aaPredicted RBP14□□□□□ -0.17
GGPS1-207ENST00000489692 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
GGPS1-207ENST00000489692 TNRC18O15417 2968 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-207ENST00000489692 A0A1W2PRG0 241 aa13.99□□□□□ -0.17
GGPS1-207ENST00000489692 SGPL1O95470 568 aa13.99□□□□□ -0.17
GGPS1-207ENST00000489692 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-207ENST00000489692 RGS2P41220 211 aa13.99□□□□□ -0.17
GGPS1-207ENST00000489692 PLS1Q14651 629 aa13.99□□□□□ -0.17
GGPS1-207ENST00000489692 OTUD7AQ8TE49 926 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-207ENST00000489692 OSBP2Q969R2 916 aa13.99□□□□□ -0.17
GGPS1-207ENST00000489692 STRBPQ96SI9 672 aaKnown RBP13.99□□□□□ -0.17
GGPS1-207ENST00000489692 HTATIP2Q9BUP3 242 aa13.99□□□□□ -0.17
GGPS1-207ENST00000489692 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.17
GGPS1-207ENST00000489692 HMX1Q9NP08 348 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-207ENST00000489692 TTC41PQ6P2S7 1318 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 SMIM22K7EJ46 135 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 GPAA1O43292 621 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 MX1P20591 662 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 TRIM32Q13049 653 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 CASC1Q6TDU7 716 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 C16orf86Q6ZW13 317 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 HOXC10Q9NYD6 342 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 GJD2Q9UKL4 321 aa13.98□□□□□ -0.17
GGPS1-207ENST00000489692 SPDYE16A6NNV3 312 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-207ENST00000489692 M0R2C6 588 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 FLOT1O75955 427 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 GNAT2P19087 354 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 PDE1AP54750 535 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 COG2Q14746 738 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
GGPS1-207ENST00000489692 TRIB2Q92519 343 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 NACAP1Q9BZK3 213 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 KANSL2Q9H9L4 492 aa13.97□□□□□ -0.17
GGPS1-207ENST00000489692 RPTORQ8N122 1335 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 CNMDO75829 334 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.17
GGPS1-207ENST00000489692 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
GGPS1-207ENST00000489692 SDSP20132 328 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 HSCBQ8IWL3 235 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 LPAR1Q92633 364 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 APBA2Q99767 749 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 VCPKMTQ9H867 229 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 ZNF287Q9HBT7 754 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 GOPCQ9HD26 462 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 BTBD7Q9P203 1132 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 ISY1Q9ULR0 285 aaKnown RBP13.96□□□□□ -0.17
GGPS1-207ENST00000489692 TMX2Q9Y320 296 aa13.96□□□□□ -0.17
GGPS1-207ENST00000489692 KIAA0100Q14667 2235 aaKnown RBP13.95□□□□□ -0.18
GGPS1-207ENST00000489692 SIPA1L1O43166 1804 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 H0YGN5 161 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 XRCC5P13010 732 aaKnown RBP13.95□□□□□ -0.18
GGPS1-207ENST00000489692 MAP2K5Q13163 448 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 DPP9Q86TI2 863 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
GGPS1-207ENST00000489692 NAPBQ9H115 298 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 PAK6Q9NQU5 681 aaPredicted RBP13.95□□□□□ -0.18
GGPS1-207ENST00000489692 NR2E3Q9Y5X4 410 aa13.95□□□□□ -0.18
GGPS1-207ENST00000489692 SLC15A5A6NIM6 579 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PATL2C9JE40 543 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 WDR46O15213 610 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PRDM1O75626 825 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 SLC3A2P08195 630 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PTPREP23469 700 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 CNGA1P29973 690 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 CCL14Q16627 93 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 KIAA1755Q5JYT7 1200 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 MORN1Q5T089 497 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 LBX2Q6XYB7 198 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 NCAPG2Q86XI2 1143 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PI4K2BQ8TCG2 481 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 ATG4CQ96DT6 458 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PAWRQ96IZ0 340 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 MYO5AQ9Y4I1 1855 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 MKI67P46013 3256 aaKnown RBP13.94□□□□□ -0.18
GGPS1-207ENST00000489692 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
GGPS1-207ENST00000489692 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 EVI5O60447 810 aa13.93□□□□□ -0.18
GGPS1-207ENST00000489692 REC8O95072 547 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms