RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 GABPAQ06546 454 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 LRRC26Q2I0M4 334 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 RPAP2Q8IXW5 612 aaPredicted RBP14.41□□□□□ -0.1
SFXN3-207ENST00000489434 LPAR1Q92633 364 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.1
SFXN3-207ENST00000489434 BCL11AQ9H165 835 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 CHMP4BQ9H444 224 aaKnown RBP14.41□□□□□ -0.1
SFXN3-207ENST00000489434 ARHGEF10LQ9HCE6 1279 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 PRKAG2Q9UGJ0 569 aa14.41□□□□□ -0.1
SFXN3-207ENST00000489434 DNM1LO00429 736 aa14.4□□□□□ -0.1
SFXN3-207ENST00000489434 GUCY1A2P33402 732 aa14.4□□□□□ -0.1
SFXN3-207ENST00000489434 ARRDC4Q8NCT1 418 aa14.4□□□□□ -0.1
SFXN3-207ENST00000489434 SHCBP1Q8NEM2 672 aa14.4□□□□□ -0.1
SFXN3-207ENST00000489434 SENP6Q9GZR1 1112 aaPredicted RBP14.4□□□□□ -0.1
SFXN3-207ENST00000489434 DCP1AQ9NPI6 582 aaPredicted RBP14.4□□□□□ -0.1
SFXN3-207ENST00000489434 FLRT1Q9NZU1 646 aa14.4□□□□□ -0.1
SFXN3-207ENST00000489434 MYH8P13535 1937 aa14.4□□□□□ -0.1
SFXN3-207ENST00000489434 RAB11FIP3O75154 756 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 ADORA2AP29274 412 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 CYP2C19P33261 490 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 MDM2Q00987 491 aaPredicted RBP14.39□□□□□ -0.11
SFXN3-207ENST00000489434 PLS1Q14651 629 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 OLFML2BQ68BL8 750 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 SDR42E1Q8WUS8 393 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 MOV10L1Q9BXT6 1211 aaKnown RBP14.39□□□□□ -0.11
SFXN3-207ENST00000489434 SPATC1LQ9H0A9 340 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 MROH8Q9H579 483 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 PAG1Q9NWQ8 432 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
SFXN3-207ENST00000489434 LAMA2P24043 3122 aaKnown RBP14.39□□□□□ -0.11
SFXN3-207ENST00000489434 FRMPD3Q5JV73 1810 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 A0A1W2PRG0 241 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 KBTBD13C9JR72 458 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 DLL1O00548 723 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 FLOT1O75955 427 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 NPLOC4Q8TAT6 608 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 CCDC17Q96LX7 622 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 ARMT1Q9H993 441 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 ZBED9Q6R2W3 1325 aa14.38□□□□□ -0.11
SFXN3-207ENST00000489434 MBD4O95243 580 aa14.37□□□□□ -0.11
SFXN3-207ENST00000489434 CYBAP13498 195 aa14.37□□□□□ -0.11
SFXN3-207ENST00000489434 ERCC3P19447 782 aa14.37□□□□□ -0.11
SFXN3-207ENST00000489434 ATN1P54259 1190 aaPredicted RBP14.37□□□□□ -0.11
SFXN3-207ENST00000489434 ICA1Q05084 483 aa14.37□□□□□ -0.11
SFXN3-207ENST00000489434 NCAPG2Q86XI2 1143 aa14.37□□□□□ -0.11
SFXN3-207ENST00000489434 ABRAQ8N0Z2 381 aa14.37□□□□□ -0.11
SFXN3-207ENST00000489434 ZNF236Q9UL36 1845 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 SEPT4O43236 478 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 CYP2D6P10635 497 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 FCER1AP12319 257 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 ATP5JP18859 108 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 DSG3P32926 999 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 ZSCAN25Q6NSZ9 544 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
SFXN3-207ENST00000489434 Q7L0L9 218 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 SPICE1Q8N0Z3 855 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 MIER1Q8N108 512 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 DYNLL2Q96FJ2 89 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 VCPKMTQ9H867 229 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 STXBP5LQ9Y2K9 1186 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 TMX2Q9Y320 296 aa14.36□□□□□ -0.11
SFXN3-207ENST00000489434 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
SFXN3-207ENST00000489434 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
SFXN3-207ENST00000489434 SLC25A27O95847 323 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-207ENST00000489434 AKR1B1P15121 316 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 ADD2P35612 726 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 RTP1P59025 263 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 EVX2Q03828 476 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 GJC2Q5T442 439 aaPredicted RBP14.35□□□□□ -0.11
SFXN3-207ENST00000489434 TRPV1Q8NER1 839 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 HAUS7Q99871 368 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 BOLA2Q9H3K6 86 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 KANSL2Q9H9L4 492 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 GOPCQ9HD26 462 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 MTMR10Q9NXD2 777 aa14.35□□□□□ -0.11
SFXN3-207ENST00000489434 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 USP17L21D6R901 530 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 PRKAB2O43741 272 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 IGHA2P01877 340 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 CDK8P49336 464 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 C12orf60Q5U649 245 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 ATG4CQ96DT6 458 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 ATP11BQ9Y2G3 1177 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 RLFQ13129 1914 aa14.34□□□□□ -0.11
SFXN3-207ENST00000489434 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 RAD21O60216 631 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 COBLO75128 1261 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 COPB2P35606 906 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 KCTD2Q14681 263 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 KIAA1755Q5JYT7 1200 aa14.33□□□□□ -0.12
SFXN3-207ENST00000489434 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms