RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 ALX1Q15699 326 aa22.65■■□□□ 1.22
MRPL55-230ENST00000489430 ZNF444Q8N0Y2 327 aaPredicted RBP22.65■■□□□ 1.22
MRPL55-230ENST00000489430 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.65■■□□□ 1.22
MRPL55-230ENST00000489430 NYAP2Q9P242 653 aa22.65■■□□□ 1.22
MRPL55-230ENST00000489430 ZSWIM8A7E2V4 1837 aa22.65■■□□□ 1.22
MRPL55-230ENST00000489430 XRCC5P13010 732 aaKnown RBP22.64■■□□□ 1.21
MRPL55-230ENST00000489430 POTEEQ6S8J3 1075 aa22.64■■□□□ 1.21
MRPL55-230ENST00000489430 CCAR1Q8IX12 1150 aaKnown RBP22.64■■□□□ 1.21
MRPL55-230ENST00000489430 MB21D1Q8N884 522 aa22.64■■□□□ 1.21
MRPL55-230ENST00000489430 NKX2-3Q8TAU0 364 aa22.64■■□□□ 1.21
MRPL55-230ENST00000489430 GOPCQ9HD26 462 aa22.64■■□□□ 1.21
MRPL55-230ENST00000489430 SPDYE16A6NNV3 312 aaPredicted RBP22.63■■□□□ 1.21
MRPL55-230ENST00000489430 PPARAQ07869 468 aa22.63■■□□□ 1.21
MRPL55-230ENST00000489430 Q3C1V9 767 aa22.63■■□□□ 1.21
MRPL55-230ENST00000489430 NUDT12Q9BQG2 462 aa22.63■■□□□ 1.21
MRPL55-230ENST00000489430 PAGR1Q9BTK6 254 aa22.63■■□□□ 1.21
MRPL55-230ENST00000489430 TANGO6Q9C0B7 1094 aa22.63■■□□□ 1.21
MRPL55-230ENST00000489430 BIN2Q9UBW5 565 aaPredicted RBP22.63■■□□□ 1.21
MRPL55-230ENST00000489430 IGKV6D-41A0A0C4DH26 115 aa22.62■■□□□ 1.21
MRPL55-230ENST00000489430 FOXP2O15409 715 aa22.62■■□□□ 1.21
MRPL55-230ENST00000489430 MFAP1P55081 439 aaKnown RBP22.62■■□□□ 1.21
MRPL55-230ENST00000489430 PPP4R3BQ5MIZ7 849 aa22.62■■□□□ 1.21
MRPL55-230ENST00000489430 TRMT44Q8IYL2 757 aaKnown RBP22.62■■□□□ 1.21
MRPL55-230ENST00000489430 ANAPC4Q9UJX5 808 aa22.62■■□□□ 1.21
MRPL55-230ENST00000489430 RBBP6Q7Z6E9 1792 aaKnown RBP22.62■■□□□ 1.21
MRPL55-230ENST00000489430 MGAMO43451 1857 aa22.62■■□□□ 1.21
MRPL55-230ENST00000489430 ZMYM6O95789 1325 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 BRCA2P51587 3418 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 HIP1O00291 1037 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 CNMDO75829 334 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 GJB1P08034 283 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 CCDC129Q6ZRS4 1044 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 CLEC10AQ8IUN9 316 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 MKL1Q969V6 931 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 RILPL2Q969X0 211 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 PLIN4Q96Q06 1357 aa22.61■■□□□ 1.21
MRPL55-230ENST00000489430 A0A0D9SFI3 127 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 EN2P19622 333 aaPredicted RBP22.6■■□□□ 1.21
MRPL55-230ENST00000489430 DSG3P32926 999 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 ATP2B2Q01814 1243 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 MTFR1Q15390 333 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 KIAA1755Q5JYT7 1200 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 GPR142Q7Z601 462 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 PLEKHH3Q7Z736 793 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 NEDD1Q8NHV4 660 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 FAM227BQ96M60 508 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 PORCNQ9H237 461 aa22.6■■□□□ 1.21
MRPL55-230ENST00000489430 FLOT1O75955 427 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 HMGCRP04035 888 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 INHAP05111 366 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 CCL5P13501 91 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 SDSP20132 328 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 SPICE1Q8N0Z3 855 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 USP6NLQ92738 828 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 RNF208Q9H0X6 261 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 MTMR4Q9NYA4 1195 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 BTBD7Q9P203 1132 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 ADAMTS5Q9UNA0 930 aa22.59■■□□□ 1.21
MRPL55-230ENST00000489430 KIAA0100Q14667 2235 aaKnown RBP22.59■■□□□ 1.21
MRPL55-230ENST00000489430 PRDM1O75626 825 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 TTLL1O95922 423 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 TSPY3P0CV98 308 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 TSPY8P0CW00 308 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 ELNP15502 786 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 RGS2P41220 211 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 GJA8P48165 433 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 NMIQ13287 307 aaPredicted RBP22.58■■□□□ 1.21
MRPL55-230ENST00000489430 MORN1Q5T089 497 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 VPS53Q5VIR6 699 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 SHCBP1Q8NEM2 672 aa22.58■■□□□ 1.21
MRPL55-230ENST00000489430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.58■■□□□ 1.21
MRPL55-230ENST00000489430 CCDC171Q6TFL3 1326 aa22.57■■□□□ 1.2
MRPL55-230ENST00000489430 MYH8P13535 1937 aa22.57■■□□□ 1.2
MRPL55-230ENST00000489430 PEX10O60683 326 aa22.57■■□□□ 1.2
MRPL55-230ENST00000489430 FGRP09769 529 aa22.57■■□□□ 1.2
MRPL55-230ENST00000489430 HSPD1P10809 573 aaKnown RBP22.57■■□□□ 1.2
MRPL55-230ENST00000489430 STK11IPQ8N1F8 1099 aa22.57■■□□□ 1.2
MRPL55-230ENST00000489430 CWC22Q9HCG8 908 aaKnown RBP22.57■■□□□ 1.2
MRPL55-230ENST00000489430 SLC15A5A6NIM6 579 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 F5H6K3 240 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 STRNO43815 780 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 MYCP01106 439 aaPredicted RBP22.56■■□□□ 1.2
MRPL55-230ENST00000489430 FGAP02671 866 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 PCP11498 1178 aaKnown RBP22.56■■□□□ 1.2
MRPL55-230ENST00000489430 NT5C2P49902 561 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 KLRC3Q07444 240 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 GMCL1P1Q8NEA9 526 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 CEP95Q96GE4 821 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 APBA2Q99767 749 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 SPATC1LQ9H0A9 340 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 PAK6Q9NQU5 681 aaPredicted RBP22.56■■□□□ 1.2
MRPL55-230ENST00000489430 CLIP2Q9UDT6 1046 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 IVNS1ABPQ9Y6Y0 642 aa22.56■■□□□ 1.2
MRPL55-230ENST00000489430 GREB1LQ9C091 1923 aaPredicted RBP22.56■■□□□ 1.2
MRPL55-230ENST00000489430 ORC4O43929 436 aa22.55■■□□□ 1.2
MRPL55-230ENST00000489430 HOXC6P09630 235 aa22.55■■□□□ 1.2
MRPL55-230ENST00000489430 PTPREP23469 700 aa22.55■■□□□ 1.2
MRPL55-230ENST00000489430 IRX6P78412 446 aaPredicted RBP22.55■■□□□ 1.2
MRPL55-230ENST00000489430 TFAP4Q01664 338 aa22.55■■□□□ 1.2
MRPL55-230ENST00000489430 MAP2K5Q13163 448 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms