RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TMEM105Q8N8V8 129 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 NPLOC4Q8TAT6 608 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 PNISRQ8TF01 805 aaKnown RBP9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 PABPC5Q96DU9 382 aaKnown RBP9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 ANKRD2Q9GZV1 360 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 STARD7Q9NQZ5 370 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
EXOSC3-206ENST00000489414 MYH3P11055 1940 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 DOCK2Q92608 1830 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 HTATSF1O43719 755 aaKnown RBP9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 EIF2S2P20042 333 aaKnown RBP9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 ZNF804AQ7Z570 1209 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 CCAR1Q8IX12 1150 aaKnown RBP9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 KCNG4Q8TDN1 519 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 FAM151AQ8WW52 585 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 VWCEQ96DN2 955 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 SUGCTQ9HAC7 445 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 RBPJLQ9UBG7 517 aa9.78□□□□□ -0.84
EXOSC3-206ENST00000489414 SIP14410 1827 aa9.77□□□□□ -0.84
EXOSC3-206ENST00000489414 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 KCNJ4P48050 445 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 CDK7P50613 346 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 HDLBPQ00341 1268 aaKnown RBP9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 APOBEC3HQ6NTF7 200 aaKnown RBP9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 PRR23BQ6ZRT6 265 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 RNF180Q86T96 592 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 CCDC84Q86UT8 332 aaPredicted RBP9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 MIER1Q8N108 512 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 ZDHHC15Q96MV8 337 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 HNRNPABQ99729 332 aaKnown RBP9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 SEMA4AQ9H3S1 761 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 XPNPEP3Q9NQH7 507 aa9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 DSPP15924 2871 aaKnown RBP9.77□□□□□ -0.85
EXOSC3-206ENST00000489414 MYO18BQ8IUG5 2567 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 SLC15A5A6NIM6 579 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 SNAP23O00161 211 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 STXBP3O00186 592 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 PRKAR2BP31323 418 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 HERVK_113P62684 666 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 OLFML2BQ68BL8 750 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 CRIPAKQ8N1N5 446 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 NUP133Q8WUM0 1156 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 RIPOR3Q96MK2 946 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 PCDHGC5Q9Y5F6 944 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 IGF2RP11717 2491 aa9.76□□□□□ -0.85
EXOSC3-206ENST00000489414 COL11A1P12107 1806 aaPredicted RBP9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 DCDC2BA2VCK2 349 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 TAF4O00268 1085 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 U2SURPO15042 1029 aaKnown RBP9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 MBTPS2O43462 519 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 SEC24BO95487 1268 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 PGK1P00558 417 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 PROS1P07225 676 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 PTPREP23469 700 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 HMGCS2P54868 508 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 CTSWP56202 376 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 IRX3P78415 501 aaPredicted RBP9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 GRB14Q14449 540 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 TTLL4Q14679 1199 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 GRIK5Q16478 980 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 FAM126BQ8IXS8 530 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 PHOSPHO2Q8TCD6 241 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 TEKT1Q969V4 418 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 HINFPQ9BQA5 517 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 TSEN34Q9BSV6 310 aaKnown RBP9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 GREM2Q9H772 168 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 ANKRD17O75179 2603 aaKnown RBP9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 UMODL1Q5DID0 1318 aa9.75□□□□□ -0.85
EXOSC3-206ENST00000489414 A0A1B0GUL7 405 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 CTNND1O60716 968 aaKnown RBP9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 GLRX3O76003 335 aaKnown RBP9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 PCCAP05165 728 aaPredicted RBP9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 LTBRP36941 435 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 ACLYP53396 1101 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 CBX2Q14781 532 aaPredicted RBP9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 ZFPM1Q8IX07 1006 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 DCLK2Q8N568 766 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 RUBCNQ92622 972 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 ANGPTL2Q9UKU9 493 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 ZMIZ1Q9ULJ6 1067 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 NDUFB9Q9Y6M9 179 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 ZNF236Q9UL36 1845 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 CLSPNQ9HAW4 1339 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 PTPRSQ13332 1948 aa9.74□□□□□ -0.85
EXOSC3-206ENST00000489414 LOC730098B7Z3J9 87 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 KIF28PB7ZC32 967 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 RARBP10826 455 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 HOXA7P31268 230 aaPredicted RBP9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 CHRNDQ07001 517 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 TCP10Q12799 353 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 SPP2Q13103 211 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 HERC6Q8IVU3 1022 aa9.73□□□□□ -0.85
EXOSC3-206ENST00000489414 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms