RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 NPLOC4Q8TAT6 608 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 GAS2L1Q99501 681 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-212ENST00000489378 LRFN3Q9BTN0 628 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 SLC4A5Q9BY07 1137 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 CWC22Q9HCG8 908 aaKnown RBP11.45□□□□□ -0.58
SSBP1-212ENST00000489378 HCN4Q9Y3Q4 1203 aa11.45□□□□□ -0.58
SSBP1-212ENST00000489378 PLXNA1Q9UIW2 1896 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 KBTBD13C9JR72 458 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 EYA2O00167 538 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 CNMDO75829 334 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 IGHA2P01877 340 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 CYBAP13498 195 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
SSBP1-212ENST00000489378 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
SSBP1-212ENST00000489378 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
SSBP1-212ENST00000489378 DENND2AQ9ULE3 1009 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 XIRP2A4UGR9 3374 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 REV3LO60673 3130 aa11.44□□□□□ -0.58
SSBP1-212ENST00000489378 SLC15A5A6NIM6 579 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 HOXC6P09630 235 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 BMP1P13497 986 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 PTPREP23469 700 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-212ENST00000489378 WDR78Q5VTH9 848 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 ATG9AQ7Z3C6 839 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 EPHX3Q9H6B9 360 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 PLA2G2EQ9NZK7 142 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 ABCF2Q9UG63 623 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 IL16Q14005 1332 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 SIPA1L1O43166 1804 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 GRXCR1A8MXD5 290 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 C19orf81C9J6K1 198 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 SEMA3EO15041 775 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
SSBP1-212ENST00000489378 CLTBP09497 229 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 FPGSQ05932 587 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 GTF3C2Q8WUA4 911 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-212ENST00000489378 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 TACC3Q9Y6A5 838 aa11.43□□□□□ -0.58
SSBP1-212ENST00000489378 CHD7Q9P2D1 2997 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 BHMG1C9JSJ3 638 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-212ENST00000489378 RAG1P15918 1043 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 IGFBP4P22692 258 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 ADORA1P30542 326 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 MECOMQ03112 1051 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 GRB14Q14449 540 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 LRRC41Q15345 812 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 ALYREFQ86V81 257 aaKnown RBP11.42□□□□□ -0.58
SSBP1-212ENST00000489378 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
SSBP1-212ENST00000489378 PBX4Q9BYU1 374 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
SSBP1-212ENST00000489378 ASNSP08243 561 aa11.41□□□□□ -0.58
SSBP1-212ENST00000489378 TFF2Q03403 129 aa11.41□□□□□ -0.58
SSBP1-212ENST00000489378 RASGRF1Q13972 1273 aa11.41□□□□□ -0.58
SSBP1-212ENST00000489378 KCTD12Q96CX2 325 aaKnown RBP11.41□□□□□ -0.58
SSBP1-212ENST00000489378 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
SSBP1-212ENST00000489378 DNAJC18Q9H819 358 aa11.41□□□□□ -0.58
SSBP1-212ENST00000489378 CXXC1Q9P0U4 656 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-212ENST00000489378 HERC5Q9UII4 1024 aaKnown RBP11.41□□□□□ -0.58
SSBP1-212ENST00000489378 SMCHD1A6NHR9 2005 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 SEPT4O43236 478 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 PQBP1O60828 265 aaKnown RBP11.4□□□□□ -0.58
SSBP1-212ENST00000489378 GDF11O95390 407 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 KCNQ1P51787 676 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 CCNA1P78396 465 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.58
SSBP1-212ENST00000489378 FAM47AQ5JRC9 791 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 CCDC102BQ68D86 513 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 CCDC129Q6ZRS4 1044 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 SNX27Q96L92 541 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 ZBED2Q9BTP6 218 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
SSBP1-212ENST00000489378 TMEM31Q5JXX7 168 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 C16orf59Q7L2K0 433 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 SIL1Q9H173 461 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 PHF24Q9UPV7 400 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 IVNS1ABPQ9Y6Y0 642 aa11.39□□□□□ -0.59
SSBP1-212ENST00000489378 ZYXQ15942 572 aaKnown RBP11.38□□□□□ -0.59
SSBP1-212ENST00000489378 SPTY2D1Q68D10 685 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-212ENST00000489378 CEP126Q9P2H0 1117 aa11.38□□□□□ -0.59
SSBP1-212ENST00000489378 PI4KBQ9UBF8 816 aa11.38□□□□□ -0.59
SSBP1-212ENST00000489378 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms