RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 SLIT2O94813 1529 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 DYRK3O43781 588 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
PDCD4-209ENST00000489049 NEK4P51957 841 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 CUL4AQ13619 759 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 RAB3GAP1Q15042 981 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 VPS72Q15906 364 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 CCDC57Q2TAC2 916 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 TRAPPC3LQ5T215 181 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 IER5Q5VY09 327 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 UNC5CLQ8IV45 518 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 DNAJC10Q8IXB1 793 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 ZSCAN31Q96LW9 406 aaPredicted RBP7.93□□□□□ -1.14
PDCD4-209ENST00000489049 HAUS7Q99871 368 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 LSG1Q9H089 658 aaKnown RBP7.93□□□□□ -1.14
PDCD4-209ENST00000489049 PA2G4Q9UQ80 394 aaKnown RBP7.93□□□□□ -1.14
PDCD4-209ENST00000489049 SPATA31A6Q5VVP1 1343 aa7.93□□□□□ -1.14
PDCD4-209ENST00000489049 CICQ96RK0 1608 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 NUP188Q5SRE5 1749 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 ZFYP08048 801 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 IFIT5Q13325 482 aaKnown RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 ANKRD1Q15327 319 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 RTN1Q16799 776 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 CLEC4GQ6UXB4 293 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 ZNF512BQ96KM6 892 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 GSX2Q9BZM3 304 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 JPH1Q9HDC5 661 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 SH2B1Q9NRF2 756 aaPredicted RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 PODXL2Q9NZ53 605 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 ZNF652Q9Y2D9 606 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 ZNF831Q5JPB2 1677 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
PDCD4-209ENST00000489049 WNK3Q9BYP7 1800 aa7.92□□□□□ -1.14
PDCD4-209ENST00000489049 A0A0A0MRY4 1105 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 C9orf172C9J069 976 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 TGFBR3LH3BV60 316 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 EIF5P55010 431 aaKnown RBP7.91□□□□□ -1.14
PDCD4-209ENST00000489049 TFCP2Q12800 502 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 CCDC158Q5M9N0 1113 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 NLRP10Q86W26 655 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 MAP4K1Q92918 833 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 FSD1Q9BTV5 496 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 IGFLR1Q9H665 355 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 HELLSQ9NRZ9 838 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 CCDC87Q9NVE4 849 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 RTL9Q8NET4 1388 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 TOGARAM1Q9Y4F4 1720 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 ITGB4P16144 1822 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 AK9Q5TCS8 1911 aa7.91□□□□□ -1.14
PDCD4-209ENST00000489049 SPEF2Q9C093 1822 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 NRAPQ86VF7 1730 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 CCDC171Q6TFL3 1326 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 PDE8AO60658 829 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 ELNP15502 786 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 SELPP16109 830 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 DEKP35659 375 aaKnown RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 ADGRE1Q14246 886 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 NECTIN1Q15223 517 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 FOXD4L6Q3SYB3 417 aaPredicted RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 CRTC2Q53ET0 693 aaPredicted RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 TAF7LQ5H9L4 462 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 USPL1Q5W0Q7 1092 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 TSHZ3Q63HK5 1081 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 FOXD4L3Q6VB84 417 aaPredicted RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 ATG9AQ7Z3C6 839 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 ZNF34Q8IZ26 560 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 KBTBD3Q8NAB2 608 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 NUDT8Q8WV74 236 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 HINFPQ9BQA5 517 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 CCDC8Q9H0W5 538 aaPredicted RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 SIL1Q9H173 461 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 DMGDHQ9UI17 866 aaKnown RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 DBNLQ9UJU6 430 aaKnown RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 NAGPAQ9UK23 515 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 LIMCH1Q9UPQ0 1083 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 BCS1LQ9Y276 419 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.9□□□□□ -1.14
PDCD4-209ENST00000489049 CYP46A1Q9Y6A2 500 aa7.9□□□□□ -1.14
PDCD4-209ENST00000489049 PALLDQ8WX93 1383 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 MROH5Q6ZUA9 1318 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 SH3TC1Q8TE82 1336 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 ANKRD18BA2A2Z9 1011 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 UBAP1LF5GYI3 381 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 IGSF3O75054 1194 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 NFKB1P19838 968 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 RFX1P22670 979 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 SSFA2P28290 1259 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 KCNJ4P48050 445 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 SIK1P57059 783 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 PTK7Q13308 1070 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 CCINQ13939 588 aa7.89□□□□□ -1.15
PDCD4-209ENST00000489049 MBTPS1Q14703 1052 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms