RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ZSWIM5Q9P217 1185 aa4.34□□□□□ -1.71
CALD1-221ENST00000489019 CARMIL2Q6F5E8 1435 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
CALD1-221ENST00000489019 SCAMP3O14828 347 aaKnown RBP4.33□□□□□ -1.72
CALD1-221ENST00000489019 RGS13O14921 159 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 ESR1P03372 595 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 SRFP11831 508 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 POLR2BP30876 1174 aaKnown RBP4.33□□□□□ -1.72
CALD1-221ENST00000489019 MCM4P33991 863 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 TNNI2P48788 182 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 CDCP2Q5VXM1 449 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 PIWIL2Q8TC59 973 aaKnown RBP4.33□□□□□ -1.72
CALD1-221ENST00000489019 RNF141Q8WVD5 230 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 NKD1Q969G9 470 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 ATG4CQ96DT6 458 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 C19orf73Q9NVV2 129 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 LMCD1Q9NZU5 365 aa4.33□□□□□ -1.72
CALD1-221ENST00000489019 DDX41Q9UJV9 622 aaKnown RBP4.33□□□□□ -1.72
CALD1-221ENST00000489019 WRNQ14191 1432 aaPredicted RBP eCLIP4.32□□□□□ -1.72
CALD1-221ENST00000489019 SHISA3A0PJX4 238 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 PAX4O43316 350 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 RAG1P15918 1043 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 GBP1P32455 592 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 ZNF165P49910 485 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 HDLBPQ00341 1268 aaKnown RBP4.32□□□□□ -1.72
CALD1-221ENST00000489019 GAB4Q2WGN9 574 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 ATG4DQ86TL0 474 aaPredicted RBP4.32□□□□□ -1.72
CALD1-221ENST00000489019 FMNL2Q96PY5 1086 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 GPR62Q9BZJ7 368 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 CNNM2Q9H8M5 875 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 CCDC9Q9Y3X0 531 aaKnown RBP4.32□□□□□ -1.72
CALD1-221ENST00000489019 RNF114Q9Y508 228 aa4.32□□□□□ -1.72
CALD1-221ENST00000489019 EEA1Q15075 1411 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 MEIS3P2A8K0S8 358 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 JUNBP17275 347 aaPredicted RBP4.31□□□□□ -1.72
CALD1-221ENST00000489019 TPP2P29144 1249 aaPredicted RBP4.31□□□□□ -1.72
CALD1-221ENST00000489019 MLECQ14165 292 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 C9orf131Q5VYM1 1079 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 NLRC3Q7RTR2 1065 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 TMEM40Q8WWA1 233 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 ASPNQ9BXN1 380 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 ZNRF3Q9ULT6 936 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 CTNND2Q9UQB3 1225 aa4.31□□□□□ -1.72
CALD1-221ENST00000489019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.31□□□□□ -1.72
CALD1-221ENST00000489019 SOGA1O94964 1423 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 DNAJC25-GNG10A0A024R161 153 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 ACRP10323 421 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 NME1P15531 152 aaKnown RBP4.3□□□□□ -1.72
CALD1-221ENST00000489019 PAK2Q13177 524 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 RALGPS1Q5JS13 557 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 FYB2Q5VWT5 728 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 TMPRSS7Q7RTY8 843 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 TSPYL5Q86VY4 417 aaPredicted RBP4.3□□□□□ -1.72
CALD1-221ENST00000489019 CREG2Q8IUH2 290 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 TMEM192Q8IY95 271 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 FLAD1Q8NFF5 587 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 ZNF428Q96B54 188 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 ASIC4Q96FT7 647 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 SLC9A7Q96T83 725 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 TRIT1Q9H3H1 467 aaKnown RBP4.3□□□□□ -1.72
CALD1-221ENST00000489019 KCNH3Q9ULD8 1083 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 PPT2Q9UMR5 302 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 HMGXB3Q12766 1538 aa4.3□□□□□ -1.72
CALD1-221ENST00000489019 TNFRSF10CO14798 259 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 SNW1Q13573 536 aaKnown RBP4.29□□□□□ -1.72
CALD1-221ENST00000489019 NBPF12Q5TAG4 269 aaPredicted RBP4.29□□□□□ -1.72
CALD1-221ENST00000489019 NT5DC4Q86YG4 428 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 ZNF654Q8IZM8 581 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 ZNF512BQ96KM6 892 aaPredicted RBP4.29□□□□□ -1.72
CALD1-221ENST00000489019 ALPK1Q96QP1 1244 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.29□□□□□ -1.72
CALD1-221ENST00000489019 GPATCH2Q9NW75 528 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 SLAMF8Q9P0V8 285 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 DUSP13Q9UII6 198 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 NCAPD3P42695 1498 aa4.29□□□□□ -1.72
CALD1-221ENST00000489019 SYNJ1O43426 1573 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 FAM86C2PA6NEL3 165 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 BIN1O00499 593 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 GDNFP39905 211 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 CCNFP41002 786 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 ERVFC1P60507 584 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 RAD51AP2Q09MP3 1159 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 LRRFIP1Q32MZ4 808 aaKnown RBP4.28□□□□□ -1.72
CALD1-221ENST00000489019 OGFOD2Q6N063 350 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 TMC3Q7Z5M5 1100 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 FAM168AQ92567 244 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 SLC6A18Q96N87 628 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 HDAC8Q9BY41 377 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 ADAMTS10Q9H324 1103 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 GINM1Q9NU53 330 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 PCDHA11Q9Y5I1 949 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 GOLGA3Q08378 1498 aa4.28□□□□□ -1.72
CALD1-221ENST00000489019 RUSC2Q8N2Y8 1516 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 ZNF503-AS2A6NEH8 195 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.27□□□□□ -1.73
CALD1-221ENST00000489019 CLEC3AO75596 197 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 EGR3Q06889 387 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms