RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 LBX1P52954 281 aa17.9■□□□□ 0.46
FDPS-213ENST00000489003 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.46
FDPS-213ENST00000489003 F5H6K3 240 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 GPR25O00155 361 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 TLR2O60603 784 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 VCAM1P19320 739 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 KLRC3Q07444 240 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 CATSPERGQ6ZRH7 1159 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 P2RX7Q99572 595 aaKnown RBP17.89■□□□□ 0.45
FDPS-213ENST00000489003 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 STX8Q9UNK0 236 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.45
FDPS-213ENST00000489003 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 REC8O95072 547 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 TRDNQ13061 729 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
FDPS-213ENST00000489003 PPP4R3BQ5MIZ7 849 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 RCSD1Q6JBY9 416 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 C17orf99Q6UX52 265 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 CYB5R4Q7L1T6 521 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 SPICE1Q8N0Z3 855 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 TTC14Q96N46 770 aa17.88■□□□□ 0.45
FDPS-213ENST00000489003 PARK7Q99497 189 aaKnown RBP17.88■□□□□ 0.45
FDPS-213ENST00000489003 ASCC2Q9H1I8 757 aaPredicted RBP17.88■□□□□ 0.45
FDPS-213ENST00000489003 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
FDPS-213ENST00000489003 NCOA7Q8NI08 942 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 ANKS1AQ92625 1134 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 LPAR1Q92633 364 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 KCNB2Q92953 911 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 TMEM47Q9BQJ4 181 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 RPAP3Q9H6T3 665 aaPredicted RBP17.87■□□□□ 0.45
FDPS-213ENST00000489003 GOPCQ9HD26 462 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 CPA4Q9UI42 421 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 PNMA3Q9UL41 463 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 SYNPO2Q9UMS6 1093 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 ADGRA2Q96PE1 1338 aa17.87■□□□□ 0.45
FDPS-213ENST00000489003 RAD21O60216 631 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 HSPA4P34932 840 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 TSGA10IPQ3SY00 556 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 SLFN13Q68D06 897 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 IQCA1Q86XH1 822 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 DGKHQ86XP1 1220 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
FDPS-213ENST00000489003 ZNF296Q8WUU4 475 aaPredicted RBP17.86■□□□□ 0.45
FDPS-213ENST00000489003 ZSCAN10Q96SZ4 725 aaPredicted RBP17.86■□□□□ 0.45
FDPS-213ENST00000489003 WDR46O15213 610 aaKnown RBP17.85■□□□□ 0.45
FDPS-213ENST00000489003 EPB41L2O43491 1005 aaKnown RBP17.85■□□□□ 0.45
FDPS-213ENST00000489003 NDUFB10O96000 172 aa17.85■□□□□ 0.45
FDPS-213ENST00000489003 BCRP11274 1271 aa17.85■□□□□ 0.45
FDPS-213ENST00000489003 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
FDPS-213ENST00000489003 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
FDPS-213ENST00000489003 CCDC178Q5BJE1 867 aa17.85■□□□□ 0.45
FDPS-213ENST00000489003 POTEEQ6S8J3 1075 aa17.85■□□□□ 0.45
FDPS-213ENST00000489003 MB21D2Q8IYB1 491 aaPredicted RBP17.85■□□□□ 0.45
FDPS-213ENST00000489003 PRDM10Q9NQV6 1147 aa17.85■□□□□ 0.45
FDPS-213ENST00000489003 FKTNO75072 461 aa17.84■□□□□ 0.45
FDPS-213ENST00000489003 HERVK_113P62684 666 aa17.84■□□□□ 0.45
FDPS-213ENST00000489003 SP3Q02447 781 aa17.84■□□□□ 0.45
FDPS-213ENST00000489003 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
FDPS-213ENST00000489003 COG2Q14746 738 aa17.84■□□□□ 0.45
FDPS-213ENST00000489003 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
FDPS-213ENST00000489003 RALYLQ86SE5 291 aaKnown RBP17.84■□□□□ 0.45
FDPS-213ENST00000489003 SMCR8Q8TEV9 937 aaPredicted RBP17.84■□□□□ 0.45
FDPS-213ENST00000489003 NUP88Q99567 741 aaPredicted RBP17.84■□□□□ 0.45
FDPS-213ENST00000489003 RLFQ13129 1914 aa17.84■□□□□ 0.45
FDPS-213ENST00000489003 SEC24BO95487 1268 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 MCCP23508 829 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 GCLCP48506 637 aaPredicted RBP17.83■□□□□ 0.44
FDPS-213ENST00000489003 ANTXR2P58335 489 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 SEC23AQ15436 765 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.44
FDPS-213ENST00000489003 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 TANGO6Q9C0B7 1094 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 HOXC10Q9NYD6 342 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 RBPJLQ9UBG7 517 aa17.83■□□□□ 0.44
FDPS-213ENST00000489003 TNKSO95271 1327 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 PEX10O60683 326 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 BMP3P12645 472 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
FDPS-213ENST00000489003 DSG3P32926 999 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 Q3C1V9 767 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 NEK1Q96PY6 1258 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 UBAC1Q9BSL1 405 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 SNX14Q9Y5W7 946 aa17.82■□□□□ 0.44
FDPS-213ENST00000489003 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms