RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 KIF23Q02241 960 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 MECOMQ03112 1051 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 CTDSPL2Q05D32 466 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 ZRSR1Q15695 479 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 RRP12Q5JTH9 1297 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 ZNF772Q68DY9 489 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 PRR5LQ6MZQ0 368 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 FAM173BQ6P4H8 233 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 MICU3Q86XE3 530 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 CCAR1Q8IX12 1150 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 FAM177A1Q8N128 213 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 NLGN1Q8N2Q7 840 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 LINC00301Q8NCQ3 95 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 RNF214Q8ND24 703 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 TDRD7Q8NHU6 1098 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 CCDC34Q96HJ3 373 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 PGBD1Q96JS3 809 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 USP28Q96RU2 1077 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 ZSCAN10Q96SZ4 725 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 MAP3K14Q99558 947 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 NAT10Q9H0A0 1025 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 TMX4Q9H1E5 349 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 WDR70Q9NW82 654 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 USP25Q9UHP3 1055 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 NOL7Q9UMY1 257 aaKnown RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 CEP131Q9UPN4 1083 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 SUGT1Q9Y2Z0 365 aa7.66□□□□□ -1.18
HDLBP-243ENST00000488923 MORC2Q9Y6X9 1032 aaPredicted RBP7.66□□□□□ -1.18
HDLBP-243ENST00000488923 KLRG2A4D1S0 409 aaPredicted RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 PLSCR1O15162 318 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 SPTLC2O15270 562 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 COL1A1P02452 1464 aaPredicted RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 PTMAP06454 111 aaKnown RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 KIF5BP33176 963 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 GNAQP50148 359 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 TYRO3Q06418 890 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 NTRK3Q16288 839 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 STX1AQ16623 288 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 RILPL1Q5EBL4 403 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 IFIT1BQ5T764 474 aaKnown RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 ANO1Q5XXA6 986 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 KRT40Q6A162 431 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 PTF1AQ7RTS3 328 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 ZNF654Q8IZM8 581 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 FANCBQ8NB91 859 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 TIGD1Q96MW7 591 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 FOXP1Q9H334 677 aaPredicted RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 ANO10Q9NW15 660 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 HOOK1Q9UJC3 728 aaKnown RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 GGA1Q9UJY5 639 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.18
HDLBP-243ENST00000488923 IRS2Q9Y4H2 1338 aa7.65□□□□□ -1.18
HDLBP-243ENST00000488923 TAF1LQ8IZX4 1826 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 MAST2Q6P0Q8 1798 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 TNKSO95271 1327 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 USP17L21D6R901 530 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 GOLGA6L19H0YKK7 550 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CUTAO60888 179 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 IL1R1P14778 569 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CMA1P23946 247 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CDC27P30260 824 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 RBM6P78332 1123 aaKnown RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 GUCY1B3Q02153 619 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CHAF1AQ13111 956 aaPredicted RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 DHX8Q14562 1220 aaKnown RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 SLC39A14Q15043 492 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 SEC23AQ15436 765 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 PUS10Q3MIT2 529 aaKnown RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CTR9Q6PD62 1173 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 ELOA2Q8IYF1 753 aaPredicted RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CRACR2BQ8N4Y2 399 aaPredicted RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 FSIP1Q8NA03 581 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 CTCFLQ8NI51 663 aaPredicted RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 SLC16A10Q8TF71 515 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 SDR42E1Q8WUS8 393 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 SLC26A6Q9BXS9 759 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 DCP1AQ9NPI6 582 aaPredicted RBP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 LRRC4BQ9NT99 713 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 TFCP2L1Q9NZI6 479 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.64□□□□□ -1.19
HDLBP-243ENST00000488923 A0A1B0GUL6 1792 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
HDLBP-243ENST00000488923 ROBO3Q96MS0 1386 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 FAM237AA0A1B0GTK4 181 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 PRPF3O43395 683 aaKnown RBP7.63□□□□□ -1.19
HDLBP-243ENST00000488923 RANBP6O60518 1105 aaKnown RBP7.63□□□□□ -1.19
HDLBP-243ENST00000488923 UFL1O94874 794 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 MMP1P03956 469 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 POLR3DP05423 398 aaPredicted RBP7.63□□□□□ -1.19
HDLBP-243ENST00000488923 ALDH1B1P30837 517 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 PDE6BP35913 854 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 USP5P45974 858 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 ZNF165P49910 485 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 DYNLL1P63167 89 aaKnown RBP7.63□□□□□ -1.19
HDLBP-243ENST00000488923 TPM4P67936 248 aa7.63□□□□□ -1.19
HDLBP-243ENST00000488923 KIAA2012Q0VF49 1180 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms