RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 SHISA4Q96DD7 197 aa16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 UNC93B1Q9H1C4 597 aa16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 VCPKMTQ9H867 229 aa16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 KANSL2Q9H9L4 492 aa16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 TMX2Q9Y320 296 aa16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 COL11A1P12107 1806 aaPredicted RBP16.51■□□□□ 0.23
SPTLC1-207ENST00000488921 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 COG2Q14746 738 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 ZMYM1Q5SVZ6 1142 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 PLEKHH3Q7Z736 793 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 U2AF1L4Q8WU68 220 aaKnown RBP16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 PORCNQ9H237 461 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 HOXC10Q9NYD6 342 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
SPTLC1-207ENST00000488921 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 SMIM22K7EJ46 135 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 PEX10O60683 326 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 CNMDO75829 334 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 RGS2P41220 211 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 PDE1AP54750 535 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 Q3C1V9 767 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 TICAM2Q86XR7 235 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 CLEC10AQ8IUN9 316 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 EVI5LQ96CN4 794 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 EPB41L4AQ9HCS5 686 aaPredicted RBP16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 PAK6Q9NQU5 681 aaPredicted RBP16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
SPTLC1-207ENST00000488921 SGPL1O95470 568 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 CYP2B6P20813 491 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 WDR78Q5VTH9 848 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 SMC5Q8IY18 1101 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 APBA2Q99767 749 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 NAPBQ9H115 298 aa16.48■□□□□ 0.23
SPTLC1-207ENST00000488921 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 FLOT1O75955 427 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 RASA1P20936 1047 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 MORN1Q5T089 497 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 TRIB2Q92519 343 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 DEFB118Q96PH6 123 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 HMX1Q9NP08 348 aaPredicted RBP16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 BTBD7Q9P203 1132 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 FRMPD3Q5JV73 1810 aa16.47■□□□□ 0.23
SPTLC1-207ENST00000488921 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 PDE4BQ07343 736 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 MAP2K5Q13163 448 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 USP6NLQ92738 828 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 HTATIP2Q9BUP3 242 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
SPTLC1-207ENST00000488921 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 PTPREP23469 700 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 DSG3P32926 999 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 SHCBP1Q8NEM2 672 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 NYAP2Q9P242 653 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 PLIN4Q96Q06 1357 aa16.45■□□□□ 0.22
SPTLC1-207ENST00000488921 RAD21O60216 631 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 PPARAQ07869 468 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 GRB14Q14449 540 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 MAP3K21Q5TCX8 1036 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 UBE2Q1Q7Z7E8 422 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 ANKLE1Q8NAG6 615 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 ZNFX1Q9P2E3 1918 aaKnown RBP16.44■□□□□ 0.22
SPTLC1-207ENST00000488921 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 STRNO43815 780 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 ATG4CQ96DT6 458 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 MROH8Q9H579 483 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
SPTLC1-207ENST00000488921 PLXNA1Q9UIW2 1896 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms