RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 FAM196BA6NMK8 535 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 PLA2G6O60733 806 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
USP11-209ENST00000488848 PDHBP11177 359 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 FDPSP14324 419 aaKnown RBP12.46□□□□□ -0.41
USP11-209ENST00000488848 GJB2P29033 226 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.41
USP11-209ENST00000488848 SEPT2Q15019 361 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 GPATCH4Q5T3I0 446 aaKnown RBP12.46□□□□□ -0.41
USP11-209ENST00000488848 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 KRT26Q7Z3Y9 468 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 CTCFLQ8NI51 663 aaPredicted RBP12.46□□□□□ -0.41
USP11-209ENST00000488848 DCAF4Q8WV16 495 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
USP11-209ENST00000488848 NCOA5Q9HCD5 579 aaKnown RBP12.46□□□□□ -0.41
USP11-209ENST00000488848 PTPRFP10586 1907 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 CPLX1O14810 134 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 JAK2O60674 1132 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 SLC34A2O95436 690 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 EEF2P13639 858 aaKnown RBP12.45□□□□□ -0.42
USP11-209ENST00000488848 YY1P25490 414 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 STK3Q13188 491 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 LDHDQ86WU2 507 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 SCYL3Q8IZE3 742 aa12.45□□□□□ -0.42
USP11-209ENST00000488848 WDR33Q9C0J8 1336 aaKnown RBP12.44□□□□□ -0.42
USP11-209ENST00000488848 LOC285556D6RIA3 1793 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
USP11-209ENST00000488848 GDF11O95390 407 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 DEXIO95424 95 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 SYT1P21579 422 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 FKBP1BP68106 108 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 CCT2P78371 535 aaKnown RBP12.44□□□□□ -0.42
USP11-209ENST00000488848 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 WASF1Q92558 559 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 MTMR8Q96EF0 704 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 MYL10Q9BUA6 226 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 RIOX1Q9H6W3 641 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 ZDHHC9Q9Y397 364 aa12.44□□□□□ -0.42
USP11-209ENST00000488848 A0A1W2PRG0 241 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 hCG_1984214I3L0E3 225 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 STX6O43752 255 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 PARP1P09874 1014 aaKnown RBP12.43□□□□□ -0.42
USP11-209ENST00000488848 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
USP11-209ENST00000488848 SLC35G1Q2M3R5 365 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 TRIM22Q8IYM9 498 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
USP11-209ENST00000488848 ZNF713Q8N859 430 aaPredicted RBP12.43□□□□□ -0.42
USP11-209ENST00000488848 FBXO18Q8NFZ0 1043 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 LPAR1Q92633 364 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 CDCA5Q96FF9 252 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 VCPKMTQ9H867 229 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
USP11-209ENST00000488848 USP17L5A8MUK1 530 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 ADM5C9JUS6 153 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 MPHOSPH10O00566 681 aaKnown RBP12.42□□□□□ -0.42
USP11-209ENST00000488848 PPP1R12BO60237 982 aaPredicted RBP12.42□□□□□ -0.42
USP11-209ENST00000488848 USP2O75604 605 aaPredicted RBP12.42□□□□□ -0.42
USP11-209ENST00000488848 RXRAP19793 462 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 PKN1Q16512 942 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 LDLRAD1Q5T700 205 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 NUP133Q8WUM0 1156 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 WRNIP1Q96S55 665 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 SH3GLB2Q9NR46 395 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
USP11-209ENST00000488848 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
USP11-209ENST00000488848 F5H6K3 240 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 CYTH3O43739 400 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 PLEKHA8P1O95397 391 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 NDUFB10O96000 172 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 ZSCAN22P10073 491 aaPredicted RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 PTPRAP18433 802 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 INPP5BP32019 993 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 NF2P35240 595 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 KLRC3Q07444 240 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 PFKFB3Q16875 520 aaPredicted RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 SH3D19Q5HYK7 790 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 LARP1BQ659C4 914 aaKnown RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 CLEC10AQ8IUN9 316 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 STAG2Q8N3U4 1231 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 BAZ2BQ9UIF8 2168 aaKnown RBP12.41□□□□□ -0.42
USP11-209ENST00000488848 SNCAIPQ9Y6H5 919 aa12.41□□□□□ -0.42
USP11-209ENST00000488848 RLFQ13129 1914 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms