RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
NUP98-212ENST00000488828 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 CCDC171Q6TFL3 1326 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 NAV1Q8NEY1 1877 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 CYP2C8P10632 490 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 HSPD1P10809 573 aaKnown RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 OSBPP22059 807 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 PPARAQ07869 468 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUP98-212ENST00000488828 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 PROCA1Q8NCQ7 364 aaPredicted RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 PARK7Q99497 189 aaKnown RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
NUP98-212ENST00000488828 ZCCHC17Q9NP64 241 aaKnown RBP13.11□□□□□ -0.31
NUP98-212ENST00000488828 FGAP02671 866 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 USP14P54578 494 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 SP3Q02447 781 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 DGKZQ13574 1117 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 MOGSQ13724 837 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 KIF22Q14807 665 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 TREML2Q5T2D2 321 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 CFHR5Q9BXR6 569 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 AGTPBP1Q9UPW5 1226 aa13.1□□□□□ -0.31
NUP98-212ENST00000488828 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
NUP98-212ENST00000488828 TLR2O60603 784 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
NUP98-212ENST00000488828 CHMLP26374 656 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 HAND2P61296 217 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
NUP98-212ENST00000488828 ICA1Q05084 483 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 DOCK1Q14185 1865 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 ARHGEF6Q15052 776 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 ALX1Q15699 326 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
NUP98-212ENST00000488828 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
NUP98-212ENST00000488828 ZNF213O14771 459 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
NUP98-212ENST00000488828 RASA1P20936 1047 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 GUCY1A2P33402 732 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 TFAP4Q01664 338 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 MFSD10Q14728 455 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 SH3D19Q5HYK7 790 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 CTNNA3Q9UI47 895 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 SLC45A1Q9Y2W3 748 aa13.08□□□□□ -0.32
NUP98-212ENST00000488828 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 FOXP2O15409 715 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
NUP98-212ENST00000488828 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
NUP98-212ENST00000488828 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 CTU1Q7Z7A3 348 aaKnown RBP13.07□□□□□ -0.32
NUP98-212ENST00000488828 CD99L2Q8TCZ2 262 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
NUP98-212ENST00000488828 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
NUP98-212ENST00000488828 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L15C9J2P7 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L13C9JLJ4 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L11C9JVI0 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L18D6R9N7 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L22D6RA61 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L17D6RBQ6 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L19D6RCP7 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L20D6RJB6 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
NUP98-212ENST00000488828 USP17L24Q0WX57 530 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 IMMTQ16891 758 aaKnown RBP13.06□□□□□ -0.32
NUP98-212ENST00000488828 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
NUP98-212ENST00000488828 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 ANKRD13CQ8N6S4 541 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
NUP98-212ENST00000488828 TANGO6Q9C0B7 1094 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
NUP98-212ENST00000488828 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
NUP98-212ENST00000488828 ATAD5Q96QE3 1844 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 FOXK1P85037 733 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 DSG2Q14126 1118 aa13.05□□□□□ -0.32
NUP98-212ENST00000488828 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms