RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 METTL16Q86W50 562 aaKnown RBP8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 TNS4Q8IZW8 715 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 ZNF710Q8N1W2 664 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 ENAHQ8N8S7 591 aaPredicted RBP8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 NUP133Q8WUM0 1156 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 ANKS1AQ92625 1134 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 GTF3C6Q969F1 213 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 GGA3Q9NZ52 723 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 STX8Q9UNK0 236 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 SCAF8Q9UPN6 1271 aaKnown RBP8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 PPP2R3BQ9Y5P8 575 aa8.84□□□□□ -0.99
APOBEC3A-203ENST00000488758 PITPNM2Q9BZ72 1349 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 DDX60LQ5H9U9 1706 aaKnown RBP8.83□□□□□ -1
APOBEC3A-203ENST00000488758 CCDC196A0A1B0GTZ2 297 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 CPLX1O14810 134 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 CALM1P0DP23 149 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 CALM2P0DP24 149 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 CALM3P0DP25 149 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 SLURP2P0DP57 97 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 SCRN1Q12765 414 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 PPP2R5BQ15173 497 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 ABCB5Q2M3G0 1257 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 SUPT20HL1Q3ZLR7 823 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 DCAF15Q66K64 600 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 APOA5Q6Q788 366 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 MIGA2Q7L4E1 593 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 MICU3Q86XE3 530 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 RAB11FIP4Q86YS3 637 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 SULF1Q8IWU6 871 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 ZNF654Q8IZM8 581 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 MARVELD3Q96A59 401 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 KLRG1Q96E93 195 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 LLPHQ9BRT6 129 aaKnown RBP8.83□□□□□ -1
APOBEC3A-203ENST00000488758 IL17RBQ9NRM6 502 aa8.83□□□□□ -1
APOBEC3A-203ENST00000488758 DDAH1O94760 285 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 TTLL1O95922 423 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 TOP1P11387 765 aaKnown RBP8.82□□□□□ -1
APOBEC3A-203ENST00000488758 RXRAP19793 462 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 RCAN1P53805 252 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 ATP2B2Q01814 1243 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 RTN1Q16799 776 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 EAPPQ56P03 285 aaPredicted RBP8.82□□□□□ -1
APOBEC3A-203ENST00000488758 TMEM179Q6ZVK1 233 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 PNMA8AQ86V59 439 aaPredicted RBP8.82□□□□□ -1
APOBEC3A-203ENST00000488758 CCDC144CPQ8IYA2 1237 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 FAM184AQ8NB25 1140 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 FANCBQ8NB91 859 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 PNMA1Q8ND90 353 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
APOBEC3A-203ENST00000488758 CEP95Q96GE4 821 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 TEPSINQ96N21 525 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 MYL10Q9BUA6 226 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 TAF1DQ9H5J8 278 aaPredicted RBP8.82□□□□□ -1
APOBEC3A-203ENST00000488758 DNAJC18Q9H819 358 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 KANSL2Q9H9L4 492 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 NCOA5Q9HCD5 579 aaKnown RBP8.82□□□□□ -1
APOBEC3A-203ENST00000488758 MTMR4Q9NYA4 1195 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 CHMP5Q9NZZ3 219 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 CLIP2Q9UDT6 1046 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 PGAP2Q9UHJ9 254 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 MYH8P13535 1937 aa8.82□□□□□ -1
APOBEC3A-203ENST00000488758 IGKV6D-41A0A0C4DH26 115 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 CDKL5O76039 1030 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 GDF11O95390 407 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 GJB2P29033 226 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 KIF5BP33176 963 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
APOBEC3A-203ENST00000488758 NUCB2P80303 420 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 HMGN5P82970 282 aaKnown RBP8.81□□□□□ -1
APOBEC3A-203ENST00000488758 MAP3K10Q02779 954 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 ST3GAL1Q11201 340 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 NBPF12Q5TAG4 269 aaPredicted RBP8.81□□□□□ -1
APOBEC3A-203ENST00000488758 PRAMEF18Q5VWM3 479 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 RCSD1Q6JBY9 416 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 JMYQ8N9B5 988 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 CTCFLQ8NI51 663 aaPredicted RBP8.81□□□□□ -1
APOBEC3A-203ENST00000488758 TMEM47Q9BQJ4 181 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
APOBEC3A-203ENST00000488758 ZNF341Q9BYN7 854 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 RBM28Q9NW13 759 aaKnown RBP8.81□□□□□ -1
APOBEC3A-203ENST00000488758 MTMR7Q9Y216 660 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 KIF3AQ9Y496 699 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 PLIN4Q96Q06 1357 aa8.81□□□□□ -1
APOBEC3A-203ENST00000488758 POTECB2RU33 542 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 GH2P01242 217 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 PDIA4P13667 645 aaKnown RBP8.8□□□□□ -1
APOBEC3A-203ENST00000488758 VEGFAP15692 232 aaPredicted RBP8.8□□□□□ -1
APOBEC3A-203ENST00000488758 PDCP20941 246 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 CDC27P30260 824 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 NF2P35240 595 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 CAP2P40123 477 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 NOVP48745 357 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 GNAQP50148 359 aa8.8□□□□□ -1
APOBEC3A-203ENST00000488758 EMP3P54852 163 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms