RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 TRMT44Q8IYL2 757 aaKnown RBP27.69■■■□□ 2.02
CUL4A-209ENST00000488558 USP6NLQ92738 828 aa27.69■■■□□ 2.02
CUL4A-209ENST00000488558 PARP14Q460N5 1801 aa27.69■■■□□ 2.02
CUL4A-209ENST00000488558 SIAH1Q8IUQ4 282 aa27.68■■■□□ 2.02
CUL4A-209ENST00000488558 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.68■■■□□ 2.023e-7■■■■□ 20.7
CUL4A-209ENST00000488558 ZBTB47Q9UFB7 747 aaPredicted RBP27.68■■■□□ 2.02
CUL4A-209ENST00000488558 RGS2P41220 211 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 COG2Q14746 738 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 MORN1Q5T089 497 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 TRIB2Q92519 343 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 CRISPLD2Q9H0B8 497 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 VCPKMTQ9H867 229 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 KANSL2Q9H9L4 492 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 ZNF236Q9UL36 1845 aa27.67■■■□□ 2.02
CUL4A-209ENST00000488558 DEFB118Q96PH6 123 aa27.66■■■□□ 2.02
CUL4A-209ENST00000488558 TANGO6Q9C0B7 1094 aa27.66■■■□□ 2.02
CUL4A-209ENST00000488558 HOXC10Q9NYD6 342 aa27.66■■■□□ 2.02
CUL4A-209ENST00000488558 BTBD7Q9P203 1132 aa27.66■■■□□ 2.02
CUL4A-209ENST00000488558 RPTORQ8N122 1335 aa27.66■■■□□ 2.02
CUL4A-209ENST00000488558 M0R2C6 588 aa27.65■■■□□ 2.02
CUL4A-209ENST00000488558 FARP2O94887 1054 aaPredicted RBP27.65■■■□□ 2.02
CUL4A-209ENST00000488558 CYP2B6P20813 491 aa27.65■■■□□ 2.02
CUL4A-209ENST00000488558 MAP3K21Q5TCX8 1036 aa27.65■■■□□ 2.02
CUL4A-209ENST00000488558 CLEC10AQ8IUN9 316 aa27.65■■■□□ 2.02
CUL4A-209ENST00000488558 APBA2Q99767 749 aa27.65■■■□□ 2.02
CUL4A-209ENST00000488558 FSD1Q9BTV5 496 aa27.65■■■□□ 2.02
CUL4A-209ENST00000488558 EPB41L4AQ9HCS5 686 aaPredicted RBP27.65■■■□□ 2.02
CUL4A-209ENST00000488558 WDR46O15213 610 aaKnown RBP27.64■■■□□ 2.02
CUL4A-209ENST00000488558 KIAA1755Q5JYT7 1200 aa27.64■■■□□ 2.02
CUL4A-209ENST00000488558 ANKRD45Q5TZF3 282 aa27.64■■■□□ 2.02
CUL4A-209ENST00000488558 MB21D1Q8N884 522 aa27.64■■■□□ 2.02
CUL4A-209ENST00000488558 CWC22Q9HCG8 908 aaKnown RBP27.64■■■□□ 2.02
CUL4A-209ENST00000488558 HMX1Q9NP08 348 aaPredicted RBP27.64■■■□□ 2.02
CUL4A-209ENST00000488558 STAP2Q9UGK3 403 aa27.64■■■□□ 2.02
CUL4A-209ENST00000488558 SLC34A2O95436 690 aa27.63■■■□□ 2.01
CUL4A-209ENST00000488558 ZKSCAN1P17029 563 aaPredicted RBP27.63■■■□□ 2.01
CUL4A-209ENST00000488558 ZMYM1Q5SVZ6 1142 aa27.63■■■□□ 2.01
CUL4A-209ENST00000488558 SLC15A5A6NIM6 579 aa27.62■■■□□ 2.01
CUL4A-209ENST00000488558 PATL2C9JE40 543 aaKnown RBP27.62■■■□□ 2.01
CUL4A-209ENST00000488558 EEF2P13639 858 aaKnown RBP27.62■■■□□ 2.01
CUL4A-209ENST00000488558 RASA1P20936 1047 aa27.62■■■□□ 2.01
CUL4A-209ENST00000488558 TDO2P48775 406 aa27.62■■■□□ 2.01
CUL4A-209ENST00000488558 MAP2K5Q13163 448 aa27.62■■■□□ 2.01
CUL4A-209ENST00000488558 HTATIP2Q9BUP3 242 aa27.62■■■□□ 2.01
CUL4A-209ENST00000488558 ZNF287Q9HBT7 754 aa27.62■■■□□ 2.01
CUL4A-209ENST00000488558 MINDY4BA8MYZ0 360 aa27.61■■■□□ 2.01
CUL4A-209ENST00000488558 TFRCP02786 760 aaKnown RBP27.61■■■□□ 2.01
CUL4A-209ENST00000488558 PTPREP23469 700 aa27.61■■■□□ 2.01
CUL4A-209ENST00000488558 TRIM32Q13049 653 aa27.61■■■□□ 2.01
CUL4A-209ENST00000488558 ANKLE1Q8NAG6 615 aa27.61■■■□□ 2.01
CUL4A-209ENST00000488558 SHCBP1Q8NEM2 672 aa27.61■■■□□ 2.01
CUL4A-209ENST00000488558 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.61■■■□□ 2.01
CUL4A-209ENST00000488558 NACAP1Q9BZK3 213 aa27.61■■■□□ 2.01
CUL4A-209ENST00000488558 DSG3P32926 999 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 GRB14Q14449 540 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 IFNL3Q8IZI9 196 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 SPICE1Q8N0Z3 855 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 MKNK2Q9HBH9 465 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 GOPCQ9HD26 462 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 IVNS1ABPQ9Y6Y0 642 aa27.6■■■□□ 2.01
CUL4A-209ENST00000488558 FLOT1O75955 427 aa27.59■■■□□ 2.01
CUL4A-209ENST00000488558 APPP05067 770 aa27.59■■■□□ 2.01
CUL4A-209ENST00000488558 HOXC6P09630 235 aa27.59■■■□□ 2.01
CUL4A-209ENST00000488558 PRKAR2AP13861 404 aaKnown RBP27.59■■■□□ 2.01
CUL4A-209ENST00000488558 TICAM2Q86XR7 235 aa27.59■■■□□ 2.01
CUL4A-209ENST00000488558 SEC62Q99442 399 aaKnown RBP27.59■■■□□ 2.01
CUL4A-209ENST00000488558 SPATC1LQ9H0A9 340 aa27.59■■■□□ 2.01
CUL4A-209ENST00000488558 PDE1AP54750 535 aa27.58■■■□□ 2.01
CUL4A-209ENST00000488558 WDR78Q5VTH9 848 aa27.58■■■□□ 2.01
CUL4A-209ENST00000488558 EVI5LQ96CN4 794 aa27.58■■■□□ 2.01
CUL4A-209ENST00000488558 MOV10L1Q9BXT6 1211 aaKnown RBP27.58■■■□□ 2.01
CUL4A-209ENST00000488558 NYAP2Q9P242 653 aa27.58■■■□□ 2.01
CUL4A-209ENST00000488558 ATP2B2Q01814 1243 aa27.57■■■□□ 2
CUL4A-209ENST00000488558 SMC5Q8IY18 1101 aa27.57■■■□□ 2
CUL4A-209ENST00000488558 COL11A1P12107 1806 aaPredicted RBP27.57■■■□□ 2
CUL4A-209ENST00000488558 MYH4Q9Y623 1939 aa27.57■■■□□ 2
CUL4A-209ENST00000488558 STRNO43815 780 aa27.56■■■□□ 2
CUL4A-209ENST00000488558 CCL14Q16627 93 aa27.56■■■□□ 2
CUL4A-209ENST00000488558 ATG4CQ96DT6 458 aa27.56■■■□□ 2
CUL4A-209ENST00000488558 RWDD1Q9H446 243 aaPredicted RBP27.56■■■□□ 2
CUL4A-209ENST00000488558 ADAMTS5Q9UNA0 930 aa27.56■■■□□ 2
CUL4A-209ENST00000488558 PLIN4Q96Q06 1357 aa27.56■■■□□ 2
CUL4A-209ENST00000488558 FRMPD3Q5JV73 1810 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 IGKV6D-41A0A0C4DH26 115 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 CACNB2Q08289 660 aaPredicted RBP27.55■■■□□ 2
CUL4A-209ENST00000488558 DPF3Q92784 378 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 NAPBQ9H115 298 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 MROH8Q9H579 483 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 OGDHLQ9ULD0 1010 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 SYNPO2Q9UMS6 1093 aa27.55■■■□□ 2
CUL4A-209ENST00000488558 ZNF444Q8N0Y2 327 aaPredicted RBP27.54■■■□□ 2
CUL4A-209ENST00000488558 H0YGN5 161 aa27.53■■■□□ 2
CUL4A-209ENST00000488558 SLC3A2P08195 630 aaKnown RBP27.53■■■□□ 2
CUL4A-209ENST00000488558 ERCC3P19447 782 aa27.53■■■□□ 2
CUL4A-209ENST00000488558 PDE4BQ07343 736 aa27.53■■■□□ 2
CUL4A-209ENST00000488558 NECAB2Q7Z6G3 386 aa27.53■■■□□ 2
CUL4A-209ENST00000488558 ABRAQ8N0Z2 381 aa27.53■■■□□ 2
CUL4A-209ENST00000488558 STK11IPQ8N1F8 1099 aa27.53■■■□□ 2
CUL4A-209ENST00000488558 CEP290O15078 2479 aa27.52■■■□□ 2
CUL4A-209ENST00000488558 PPARAQ07869 468 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms