RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 CLRN2A0PK11 232 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 LIG1P18858 919 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 OGFOD1Q8N543 542 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 OXER1Q8TDS5 423 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 JDP2Q8WYK2 163 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 NASPP49321 788 aaPredicted RBP16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 JAG1P78504 1218 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 TRIM29Q14134 588 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 RRP1BQ14684 758 aaKnown RBP16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 DIS3L2Q8IYB7 885 aaKnown RBP16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 PHF20Q9BVI0 1012 aa16.71■□□□□ 0.27
TFAP2A-215ENST00000488193 GOLGA8HP0CJ92 632 aa16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 POLR3EQ9NVU0 708 aa16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 MYH4Q9Y623 1939 aa16.7■□□□□ 0.26
TFAP2A-215ENST00000488193 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 FZD9O00144 591 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 ADAMTS3O15072 1205 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 NR5A1Q13285 461 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 NOSTRINQ8IVI9 506 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 ZSCAN29Q8IWY8 852 aaPredicted RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 CDAN1Q8IWY9 1227 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 SRCAPQ6ZRS2 3230 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 WNT10BO00744 389 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 EGFRP00533 1210 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 PDHBP11177 359 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 SCG2P13521 617 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
TFAP2A-215ENST00000488193 SYCE3A1L190 88 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 KLRF2D3W0D1 207 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 TTLL1O95922 423 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 GNAQP50148 359 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 TNIP1Q15025 636 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 PTPAQ15257 358 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 ANO1Q5XXA6 986 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 PIBF1Q8WXW3 757 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 TNFRSF25Q93038 417 aa16.68■□□□□ 0.26
TFAP2A-215ENST00000488193 YEATS4O95619 227 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 EARS2Q5JPH6 523 aaKnown RBP16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 CSRNP1Q96S65 589 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 FAM205CA6NFA0 338 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 NOM1Q5C9Z4 860 aaKnown RBP16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 CCDC183Q5T5S1 534 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 LZTS2Q9BRK4 669 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
TFAP2A-215ENST00000488193 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 SLC39A14Q15043 492 aa16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 MKL1Q969V6 931 aa16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 GOLPH3LQ9H4A5 285 aa16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 TMOD2Q9NZR1 351 aa16.66■□□□□ 0.26
TFAP2A-215ENST00000488193 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 SEPT2Q15019 361 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 GPKOWQ92917 476 aaPredicted RBP eCLIP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 ZNF541Q9H0D2 1346 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 DICER1Q9UPY3 1922 aaKnown RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 SPTLC2O15270 562 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 NR1I2O75469 434 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 SBF1O95248 1867 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 GDF11O95390 407 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 EEF2P13639 858 aaKnown RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 GNL2Q13823 731 aaKnown RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 STK38Q15208 465 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 FRMPD2Q68DX3 1309 aaPredicted RBP16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
TFAP2A-215ENST00000488193 LRSAM1Q6UWE0 723 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms