RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 NLRP12P59046 1061 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 GRM4Q14833 912 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 DHX40Q8IX18 779 aaKnown RBP17.01■□□□□ 0.31
EPHA1-205ENST00000488068 CLIC6Q96NY7 704 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 TRIM5Q9C035 493 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 TUBE1Q9UJT0 475 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 SRPRBQ9Y5M8 271 aaKnown RBP17.01■□□□□ 0.31
EPHA1-205ENST00000488068 FLT1P17948 1338 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 BECN2A8MW95 431 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 RASA1P20936 1047 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 MASTLQ96GX5 879 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 SH3GLB2Q9NR46 395 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 KCNH3Q9ULD8 1083 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 EP400Q96L91 3159 aa17.01■□□□□ 0.31
EPHA1-205ENST00000488068 SNED1Q8TER0 1413 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 TRIM75PA6NK02 468 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 PDCL2Q8N4E4 241 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 ZC3H12CQ9C0D7 883 aaKnown RBP17■□□□□ 0.31
EPHA1-205ENST00000488068 RIOK3O14730 519 aaKnown RBP17■□□□□ 0.31
EPHA1-205ENST00000488068 CDK8P49336 464 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 GTF2IP78347 998 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 NPY5RQ15761 445 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 KRBA2Q6ZNG9 492 aa17■□□□□ 0.31
EPHA1-205ENST00000488068 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
EPHA1-205ENST00000488068 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
EPHA1-205ENST00000488068 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
EPHA1-205ENST00000488068 MMP10P09238 476 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 HOOK1Q9UJC3 728 aaKnown RBP16.99■□□□□ 0.31
EPHA1-205ENST00000488068 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 MYH8P13535 1937 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
EPHA1-205ENST00000488068 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 ANKRD7Q92527 254 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
EPHA1-205ENST00000488068 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
EPHA1-205ENST00000488068 hCG_1642624A0A1W2PR95 340 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 CALML3P27482 149 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 EYA3Q99504 573 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 MAD2L2Q9UI95 211 aa16.98■□□□□ 0.31
EPHA1-205ENST00000488068 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 SLC44A5Q8NCS7 719 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 FERMT2Q96AC1 680 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 CTIFO43310 598 aaKnown RBP16.97■□□□□ 0.31
EPHA1-205ENST00000488068 NLRP5P59047 1200 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 AOPEPQ8N6M6 819 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 TMEM47Q9BQJ4 181 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 PLIN4Q96Q06 1357 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.97■□□□□ 0.31
EPHA1-205ENST00000488068 KIF20AO95235 890 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 NOVP48745 357 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 LONRF3Q496Y0 759 aa16.97■□□□□ 0.31
EPHA1-205ENST00000488068 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
EPHA1-205ENST00000488068 SMTNL1A8MU46 457 aa16.96■□□□□ 0.31
EPHA1-205ENST00000488068 RXRBP28702 533 aa16.96■□□□□ 0.31
EPHA1-205ENST00000488068 EARS2Q5JPH6 523 aaKnown RBP16.96■□□□□ 0.31
EPHA1-205ENST00000488068 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
EPHA1-205ENST00000488068 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
EPHA1-205ENST00000488068 PALM3A6NDB9 673 aaPredicted RBP16.96■□□□□ 0.3
EPHA1-205ENST00000488068 GALNT17Q6IS24 598 aa16.96■□□□□ 0.3
EPHA1-205ENST00000488068 BAZ2BQ9UIF8 2168 aaKnown RBP16.95■□□□□ 0.3
EPHA1-205ENST00000488068 A0A087WWV3 80 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 IKBKBO14920 756 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 TPM4P67936 248 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 MDM2Q00987 491 aaPredicted RBP16.95■□□□□ 0.3
EPHA1-205ENST00000488068 TTC38Q5R3I4 469 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 STYK1Q6J9G0 422 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 SMARCA1P28370 1054 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 GRIN1Q05586 938 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 HHIPL2Q6UWX4 724 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 CERS5Q8N5B7 392 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
EPHA1-205ENST00000488068 DAGLBQ8NCG7 672 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
EPHA1-205ENST00000488068 ATP2B1P20020 1258 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 PNOCQ13519 176 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 SPZ1Q9BXG8 430 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 ZNF646O15015 1829 aaPredicted RBP16.94■□□□□ 0.3
EPHA1-205ENST00000488068 MYO3BQ8WXR4 1341 aa16.94■□□□□ 0.3
EPHA1-205ENST00000488068 BIN1O00499 593 aa16.93■□□□□ 0.3
EPHA1-205ENST00000488068 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms