RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 CACNB3P54284 484 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 ERVK-9P63128 1117 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 GORABQ5T7V8 394 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 CST9Q5W186 159 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 KRT26Q7Z3Y9 468 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 AACSQ86V21 672 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 RPAP2Q8IXW5 612 aaPredicted RBP9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 OGFOD1Q8N543 542 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 HMG20BQ9P0W2 317 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 PGAP2Q9UHJ9 254 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 AKAP2Q9Y2D5 859 aa9.56□□□□□ -0.88
NECTIN3-209ENST00000488016 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 CRKP46108 304 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 DLGAP5Q15398 846 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 TTC39AQ5SRH9 613 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 TSHZ3Q63HK5 1081 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 MOB2Q70IA6 237 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 LYSMD3Q7Z3D4 306 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 CYP2U1Q7Z449 544 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 KDF1Q8NAX2 398 aaPredicted RBP9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 DCPSQ96C86 337 aaKnown RBP9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 TDRD3Q9H7E2 651 aaKnown RBP9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 ABCF2Q9UG63 623 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 HDAC9Q9UKV0 1011 aa9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 MYO5AQ9Y4I1 1855 aaKnown RBP9.55□□□□□ -0.88
NECTIN3-209ENST00000488016 AKAP11Q9UKA4 1901 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 MEN1O00255 615 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 HMMRO75330 724 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 FKBP1AP62942 108 aaKnown RBP9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 PRKG1Q13976 671 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 OTUD7AQ8TE49 926 aaPredicted RBP9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 ZNF384Q8TF68 577 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 CDCA5Q96FF9 252 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 GPR108Q9NPR9 543 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 GNL3LQ9NVN8 582 aaKnown RBP9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 DENND2AQ9ULE3 1009 aa9.54□□□□□ -0.88
NECTIN3-209ENST00000488016 TRPM7Q96QT4 1865 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 TCP10L2B9ZVM9 353 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 ZAP70P43403 619 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 GRM1Q13255 1194 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 APOBEC3HQ6NTF7 200 aaKnown RBP9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 CDC37L1Q7L3B6 337 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 SPATA5Q8NB90 893 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 WDR66Q8TBY9 1149 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 EDC3Q96F86 508 aaKnown RBP9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 ANTXR1Q9H6X2 564 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 PIH1D3Q9NQM4 214 aaKnown RBP9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 ECM29Q5VYK3 1845 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 SSC5DA1L4H1 1573 aa9.53□□□□□ -0.88
NECTIN3-209ENST00000488016 CDC14CA4D256 554 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 CHGBP05060 677 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 CYP2E1P05181 493 aaPredicted RBP9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 LDHBP07195 334 aaKnown RBP9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 SLURP2P0DP57 97 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 ERC1Q8IUD2 1116 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 TBC1D22AQ8WUA7 517 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 KIF1BPQ96EK5 621 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 CHMP4BQ9H444 224 aaKnown RBP9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 ZNF70Q9UC06 446 aaPredicted RBP9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 SERPINA10Q9UK55 444 aa9.52□□□□□ -0.89
NECTIN3-209ENST00000488016 MYH2Q9UKX2 1941 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 MYCP01106 439 aaPredicted RBP9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 GPC1P35052 558 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 SCTRP47872 440 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 MECOMQ03112 1051 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 NFIAQ12857 509 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 CCDC158Q5M9N0 1113 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 NBPF12Q5TAG4 269 aaPredicted RBP9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 ADGRA1Q86SQ6 560 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 NANOS1Q8WY41 292 aaKnown RBP9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 TEKT1Q969V4 418 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 ZIC5Q96T25 663 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 TMEM39BQ9GZU3 492 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 RAI14Q9P0K7 980 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 PITPNM2Q9BZ72 1349 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
NECTIN3-209ENST00000488016 RAB11FIP3O75154 756 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 IGHDP01880 384 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 IFIT2P09913 472 aaKnown RBP9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 UQCRFS1P1P0C7P4 283 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 RASA3Q14644 834 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 DEFB115Q30KQ5 88 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 HSP90AB4PQ58FF6 505 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 CDC42EP5Q6NZY7 148 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 DZIP1Q86YF9 867 aaKnown RBP9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms