RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 ZBTB8OSQ8IWT0 167 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 NELFBQ8WX92 580 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 A1BGP04217 495 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 PPP1R2P41236 205 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 KIF11P52732 1056 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 LONRF2Q1L5Z9 754 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 ANO1Q5XXA6 986 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 KAZNQ674X7 775 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 PPP4R1Q8TF05 950 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 U2AF1L4Q8WU68 220 aaKnown RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 HDAC11Q96DB2 347 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 CCDC68Q9H2F9 335 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 NLRC4Q9NPP4 1024 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 SMYD2Q9NRG4 433 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 CDR2Q01850 454 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 PEX26Q7Z412 305 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 MYLK4Q86YV6 388 aaPredicted RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 IFT20Q8IY31 132 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 RPS6KC1Q96S38 1066 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 LSM14BQ9BX40 385 aaKnown RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 OLA1Q9NTK5 396 aaKnown RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 VPS41P49754 854 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 YWHAEP62258 255 aaKnown RBP16.94■□□□□ 0.3
PKD1-220ENST00000487932 PRR16Q569H4 304 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 XKR9Q5GH70 373 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 KDRP35968 1356 aa16.94■□□□□ 0.3
PKD1-220ENST00000487932 RPS6KB1P23443 525 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 STK24Q9Y6E0 443 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 DLATP10515 647 aaKnown RBP16.93■□□□□ 0.3
PKD1-220ENST00000487932 ATF7P17544 494 aaPredicted RBP16.93■□□□□ 0.3
PKD1-220ENST00000487932 TFAP4Q01664 338 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 SLC12A1Q13621 1099 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 SFMBT2Q5VUG0 894 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 ADPGKQ9BRR6 497 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 RAB20Q9NX57 234 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 KRT3P12035 628 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 U2AF2P26368 475 aaKnown RBP eCLIP16.93■□□□□ 0.35e-8■■■■■ 34.6
PKD1-220ENST00000487932 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
PKD1-220ENST00000487932 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 STK38LQ9Y2H1 464 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 KRT25Q7Z3Z0 450 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 DPP9Q86TI2 863 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 CMTR1Q8N1G2 835 aaKnown RBP16.93■□□□□ 0.3
PKD1-220ENST00000487932 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
PKD1-220ENST00000487932 GANCQ8TET4 914 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 CDCA7Q9BWT1 371 aaPredicted RBP16.93■□□□□ 0.3
PKD1-220ENST00000487932 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 BANK1Q8NDB2 785 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 EFCC1Q9HA90 598 aa16.93■□□□□ 0.3
PKD1-220ENST00000487932 KRBA2Q6ZNG9 492 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 DIS3L2Q8IYB7 885 aaKnown RBP16.92■□□□□ 0.3
PKD1-220ENST00000487932 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
PKD1-220ENST00000487932 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 DBNDD2Q9BQY9 259 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 FAM207AQ9NSI2 230 aaPredicted RBP16.92■□□□□ 0.3
PKD1-220ENST00000487932 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 SMIM24O75264 130 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 MCUQ8NE86 351 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 EYA2O00167 538 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 SPATA5Q8NB90 893 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 VPS54Q9P1Q0 977 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 TBC1D10BQ4KMP7 808 aaPredicted RBP16.92■□□□□ 0.3
PKD1-220ENST00000487932 ANAPC5Q9UJX4 755 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 SLC27A2O14975 620 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 GIGYF1O75420 1035 aaPredicted RBP16.92■□□□□ 0.3
PKD1-220ENST00000487932 RRAGAQ7L523 313 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 ADAT2Q7Z6V5 191 aaKnown RBP16.92■□□□□ 0.3
PKD1-220ENST00000487932 LMNTD2Q8IXW0 634 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 PLBD2Q8NHP8 589 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 UBN1Q9NPG3 1134 aa16.92■□□□□ 0.3
PKD1-220ENST00000487932 K7ENM7 598 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 NDUFAB1O14561 156 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 MGEA5O60502 916 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 S100BP04271 92 aaPredicted RBP16.91■□□□□ 0.3
PKD1-220ENST00000487932 INPP1P49441 399 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 TRIM14Q14142 442 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 ZNF277Q9NRM2 450 aaPredicted RBP16.91■□□□□ 0.3
PKD1-220ENST00000487932 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 MAGEA1P43355 309 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 RNASELQ05823 741 aaKnown RBP16.91■□□□□ 0.3
PKD1-220ENST00000487932 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
PKD1-220ENST00000487932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.3
PKD1-220ENST00000487932 GPBP1Q86WP2 473 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 KIAA0825Q8IV33 1275 aa16.91■□□□□ 0.3
PKD1-220ENST00000487932 SMCO2A6NFE2 343 aa16.9■□□□□ 0.3
PKD1-220ENST00000487932 RPS6KA1Q15418 735 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms