RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 RPAP3Q9H6T3 665 aaPredicted RBP11.54□□□□□ -0.56
SATB1-215ENST00000487699 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 TRIM17Q9Y577 477 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 RLFQ13129 1914 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 RAD50Q92878 1312 aa11.54□□□□□ -0.56
SATB1-215ENST00000487699 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
SATB1-215ENST00000487699 OSBPP22059 807 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 MFAP1P55081 439 aaKnown RBP11.53□□□□□ -0.56
SATB1-215ENST00000487699 PDE4BQ07343 736 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
SATB1-215ENST00000487699 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
SATB1-215ENST00000487699 FAM110CQ1W6H9 321 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 FEZ1Q99689 392 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 BTBD7Q9P203 1132 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 ADAMTS5Q9UNA0 930 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 NEDD4P46934 1319 aa11.53□□□□□ -0.56
SATB1-215ENST00000487699 F5H6K3 240 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 NDUFB10O96000 172 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 NEFLP07196 543 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 PSMC4P43686 418 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 GCLCP48506 637 aaPredicted RBP11.52□□□□□ -0.57
SATB1-215ENST00000487699 KLRC3Q07444 240 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.57
SATB1-215ENST00000487699 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 RCSD1Q6JBY9 416 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 FBXO46Q6PJ61 603 aaPredicted RBP11.52□□□□□ -0.57
SATB1-215ENST00000487699 LPAR1Q92633 364 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 MAP4K1Q92918 833 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 LSG1Q9H089 658 aaKnown RBP11.52□□□□□ -0.57
SATB1-215ENST00000487699 ARHGEF10LQ9HCE6 1279 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 TCP11L1Q9NUJ3 509 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 GJD2Q9UKL4 321 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 GABRQQ9UN88 632 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.57
SATB1-215ENST00000487699 MYH8P13535 1937 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 ZNF213O14771 459 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
SATB1-215ENST00000487699 TTLL1O95922 423 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
SATB1-215ENST00000487699 CYP21A2P08686 494 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 DSG3P32926 999 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 IRX3P78415 501 aaPredicted RBP11.51□□□□□ -0.57
SATB1-215ENST00000487699 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 REPS2Q8NFH8 660 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
SATB1-215ENST00000487699 NUP88Q99567 741 aaPredicted RBP11.51□□□□□ -0.57
SATB1-215ENST00000487699 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 PORCNQ9H237 461 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 SYNPO2Q9UMS6 1093 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 PTCH2Q9Y6C5 1203 aa11.51□□□□□ -0.57
SATB1-215ENST00000487699 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
SATB1-215ENST00000487699 ERVK-9P63128 1117 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 ERVK-24P63145 666 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 ATP2B2Q01814 1243 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 COG2Q14746 738 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 FAM83BQ5T0W9 1011 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 LRRC47Q8N1G4 583 aaKnown RBP11.5□□□□□ -0.57
SATB1-215ENST00000487699 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 RUFY2Q8WXA3 655 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
SATB1-215ENST00000487699 TSPY2A6NKD2 308 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
SATB1-215ENST00000487699 GNRH1P01148 92 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 PCP11498 1178 aaKnown RBP11.49□□□□□ -0.57
SATB1-215ENST00000487699 PRKCZQ05513 592 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 MFSD6Q6ZSS7 791 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 USP6NLQ92738 828 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 SH2D4AQ9H788 454 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 ZSWIM5Q9P217 1185 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 LAMA4Q16363 1823 aa11.49□□□□□ -0.57
SATB1-215ENST00000487699 B4E1Z4 1266 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
SATB1-215ENST00000487699 IGHA2P01877 340 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 FCGRTP55899 365 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 NECTIN1Q15223 517 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 RRP12Q5JTH9 1297 aaKnown RBP11.48□□□□□ -0.57
SATB1-215ENST00000487699 CYB5R4Q7L1T6 521 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 GTF3C2Q8WUA4 911 aaPredicted RBP11.48□□□□□ -0.57
SATB1-215ENST00000487699 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 ARMC5Q96C12 935 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 TMEM47Q9BQJ4 181 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 TANGO6Q9C0B7 1094 aa11.48□□□□□ -0.57
SATB1-215ENST00000487699 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms