RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CEP131Q9UPN4 1083 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 MYH8P13535 1937 aa23.47■■□□□ 1.35
PHF1-209ENST00000487667 CTAGE5O15320 804 aa23.46■■□□□ 1.35
PHF1-209ENST00000487667 NFIAQ12857 509 aa23.46■■□□□ 1.35
PHF1-209ENST00000487667 MAD2L2Q9UI95 211 aa23.46■■□□□ 1.35
PHF1-209ENST00000487667 CLIC4Q9Y696 253 aa23.46■■□□□ 1.35
PHF1-209ENST00000487667 ADAMTSL1Q8N6G6 1762 aa23.46■■□□□ 1.35
PHF1-209ENST00000487667 ATRNL1Q5VV63 1379 aa23.46■■□□□ 1.35
PHF1-209ENST00000487667 IGKV6D-41A0A0C4DH26 115 aa23.45■■□□□ 1.35
PHF1-209ENST00000487667 TTLL1O95922 423 aa23.45■■□□□ 1.35
PHF1-209ENST00000487667 PARP1P09874 1014 aaKnown RBP23.45■■□□□ 1.35
PHF1-209ENST00000487667 GMLQ99445 158 aa23.45■■□□□ 1.35
PHF1-209ENST00000487667 SPZ1Q9BXG8 430 aa23.45■■□□□ 1.35
PHF1-209ENST00000487667 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.45■■□□□ 1.35
PHF1-209ENST00000487667 DACT1Q9NYF0 836 aa23.45■■□□□ 1.35
PHF1-209ENST00000487667 BTBD18B2RXH4 712 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 PSMD14O00487 310 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 LIG1P18858 919 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 SHMT1P34896 483 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 MAP3K11Q16584 847 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 GALNT17Q6IS24 598 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 CCAR1Q8IX12 1150 aaKnown RBP23.45■■□□□ 1.34
PHF1-209ENST00000487667 JDP2Q8WYK2 163 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 MRPS27Q92552 414 aaKnown RBP23.45■■□□□ 1.34
PHF1-209ENST00000487667 CLSTN2Q9H4D0 955 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 FAM198AQ9UFP1 575 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 PCDHA7Q9UN72 937 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 KCNJ14Q9UNX9 436 aa23.45■■□□□ 1.34
PHF1-209ENST00000487667 MORC2Q9Y6X9 1032 aaPredicted RBP23.45■■□□□ 1.34
PHF1-209ENST00000487667 FAM160A1Q05DH4 1040 aa23.44■■□□□ 1.34
PHF1-209ENST00000487667 MTMR14Q8NCE2 650 aa23.44■■□□□ 1.34
PHF1-209ENST00000487667 FTOQ9C0B1 505 aaKnown RBP eCLIP23.44■■□□□ 1.34
PHF1-209ENST00000487667 FHDC1Q9C0D6 1143 aaPredicted RBP23.44■■□□□ 1.34
PHF1-209ENST00000487667 TNMDQ9H2S6 317 aa23.44■■□□□ 1.34
PHF1-209ENST00000487667 BMP15O95972 392 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 DLGAP5Q15398 846 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 FKBP1CQ5VVH2 108 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 METTL16Q86W50 562 aaKnown RBP23.43■■□□□ 1.34
PHF1-209ENST00000487667 ZSCAN29Q8IWY8 852 aaPredicted RBP23.43■■□□□ 1.34
PHF1-209ENST00000487667 CCDC148Q8NFR7 591 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 VPS54Q9P1Q0 977 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 NOL7Q9UMY1 257 aaKnown RBP23.43■■□□□ 1.34
PHF1-209ENST00000487667 UBE2Q2LH0YL09 131 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 TPRNQ4KMQ1 711 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 ASPRV1Q53RT3 343 aa23.43■■□□□ 1.34
PHF1-209ENST00000487667 CCDC12Q8WUD4 166 aaPredicted RBP23.43■■□□□ 1.34
PHF1-209ENST00000487667 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
PHF1-209ENST00000487667 LTBP3Q9NS15 1303 aa23.42■■□□□ 1.34
PHF1-209ENST00000487667 SPDYE2BA6NHP3 402 aa23.42■■□□□ 1.34
PHF1-209ENST00000487667 RAD17O75943 681 aa23.42■■□□□ 1.34
PHF1-209ENST00000487667 SPDYE6P0CI01 402 aa23.42■■□□□ 1.34
PHF1-209ENST00000487667 AKR1B1P15121 316 aa23.42■■□□□ 1.34
PHF1-209ENST00000487667 TNIP1Q15025 636 aa23.42■■□□□ 1.34
PHF1-209ENST00000487667 hCG_1984214I3L0E3 225 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 KINO60870 393 aaKnown RBP23.41■■□□□ 1.34
PHF1-209ENST00000487667 CCDC192P0DO97 292 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 RBM43Q6ZSC3 357 aaKnown RBP23.41■■□□□ 1.34
PHF1-209ENST00000487667 ZNF713Q8N859 430 aaPredicted RBP23.41■■□□□ 1.34
PHF1-209ENST00000487667 FER1L6Q2WGJ9 1857 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 KLRF2D3W0D1 207 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 CMA1P23946 247 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 NLRP5P59047 1200 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 FSIP1Q8NA03 581 aa23.41■■□□□ 1.34
PHF1-209ENST00000487667 TDRD3Q9H7E2 651 aaKnown RBP23.41■■□□□ 1.34
PHF1-209ENST00000487667 GOLGB1Q14789 3259 aaKnown RBP23.4■■□□□ 1.34
PHF1-209ENST00000487667 NR1I2O75469 434 aa23.4■■□□□ 1.34
PHF1-209ENST00000487667 TRAPPC10P48553 1259 aa23.4■■□□□ 1.34
PHF1-209ENST00000487667 TCP10Q12799 353 aa23.4■■□□□ 1.34
PHF1-209ENST00000487667 TATDN1Q6P1N9 297 aa23.4■■□□□ 1.34
PHF1-209ENST00000487667 PRMT6Q96LA8 375 aaPredicted RBP23.4■■□□□ 1.34
PHF1-209ENST00000487667 HERC5Q9UII4 1024 aaKnown RBP23.4■■□□□ 1.34
PHF1-209ENST00000487667 MYO1BO43795 1136 aa23.39■■□□□ 1.34
PHF1-209ENST00000487667 PTPAQ15257 358 aa23.39■■□□□ 1.34
PHF1-209ENST00000487667 CERKLQ49MI3 558 aaPredicted RBP23.39■■□□□ 1.34
PHF1-209ENST00000487667 CIAPIN1Q6FI81 312 aa23.39■■□□□ 1.34
PHF1-209ENST00000487667 STAG2Q8N3U4 1231 aa23.39■■□□□ 1.34
PHF1-209ENST00000487667 KANSL2Q9H9L4 492 aa23.39■■□□□ 1.34
PHF1-209ENST00000487667 GREB1LQ9C091 1923 aaPredicted RBP23.39■■□□□ 1.34
PHF1-209ENST00000487667 CUTAO60888 179 aa23.39■■□□□ 1.33
PHF1-209ENST00000487667 SNHG28P0DPA3 235 aa23.39■■□□□ 1.33
PHF1-209ENST00000487667 RPS12P25398 132 aaKnown RBP23.39■■□□□ 1.33
PHF1-209ENST00000487667 RRP36Q96EU6 259 aaKnown RBP23.39■■□□□ 1.33
PHF1-209ENST00000487667 RTN4Q9NQC3 1192 aaKnown RBP23.39■■□□□ 1.33
PHF1-209ENST00000487667 SEC63Q9UGP8 760 aaKnown RBP23.39■■□□□ 1.33
PHF1-209ENST00000487667 DDTLA6NHG4 134 aaPredicted RBP23.38■■□□□ 1.33
PHF1-209ENST00000487667 UVSSAQ2YD98 709 aa23.38■■□□□ 1.33
PHF1-209ENST00000487667 GPATCH4Q5T3I0 446 aaKnown RBP23.38■■□□□ 1.33
PHF1-209ENST00000487667 ZFPM1Q8IX07 1006 aa23.38■■□□□ 1.33
PHF1-209ENST00000487667 ENGASEQ8NFI3 743 aa23.38■■□□□ 1.33
PHF1-209ENST00000487667 RBSNQ9H1K0 784 aa23.38■■□□□ 1.33
PHF1-209ENST00000487667 NYAP2Q9P242 653 aa23.38■■□□□ 1.33
PHF1-209ENST00000487667 MPHOSPH10O00566 681 aaKnown RBP23.37■■□□□ 1.33
PHF1-209ENST00000487667 CAVIN2O95810 425 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 PDHBP11177 359 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 CACNB3P54284 484 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 NR5A1Q13285 461 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 TMEM179Q6ZVK1 233 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 FAM151AQ8WW52 585 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 CLIP2Q9UDT6 1046 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 SYNPO2Q9UMS6 1093 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms