RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 RBM28Q9NW13 759 aaKnown RBP9.34□□□□□ -0.91
RBM28-206ENST00000487602 MYH8P13535 1937 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 JAK2O60674 1132 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 CDKL5O76039 1030 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 IFNAR1P17181 557 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 GJB2P29033 226 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 INPP5BP32019 993 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 KIF5BP33176 963 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 GNAQP50148 359 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 MAP3K9P80192 1104 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 HMGN5P82970 282 aaKnown RBP9.33□□□□□ -0.92
RBM28-206ENST00000487602 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 GRM4Q14833 912 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 NTRK3Q16288 839 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
RBM28-206ENST00000487602 LDHDQ86WU2 507 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 CTCFLQ8NI51 663 aaPredicted RBP9.33□□□□□ -0.92
RBM28-206ENST00000487602 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 CDCA5Q96FF9 252 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 NMRK2Q9NPI5 230 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
RBM28-206ENST00000487602 SYNPO2Q9UMS6 1093 aa9.33□□□□□ -0.92
RBM28-206ENST00000487602 GREB1LQ9C091 1923 aaPredicted RBP9.33□□□□□ -0.92
RBM28-206ENST00000487602 A0A1W2PRG0 241 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 PTPDC1A2A3K4 754 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 USP17L5A8MUK1 530 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 DTNBO60941 627 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 SNHG28P0DPA3 235 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 FDPSP14324 419 aaKnown RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 NF2P35240 595 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 NOL9Q5SY16 702 aaKnown RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 MAP1SQ66K74 1059 aaPredicted RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 SCYL3Q8IZE3 742 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 LRRC47Q8N1G4 583 aaKnown RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.32□□□□□ -0.92
RBM28-206ENST00000487602 ZNF526Q8TF50 670 aaPredicted RBP9.32□□□□□ -0.92
RBM28-206ENST00000487602 DDX11Q96FC9 970 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 ARHGEF10LQ9HCE6 1279 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 MAD2L2Q9UI95 211 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 FZD1Q9UP38 647 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 SSC5DA1L4H1 1573 aa9.32□□□□□ -0.92
RBM28-206ENST00000487602 PLEKHA8P1O95397 391 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 PDHBP11177 359 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 SMARCA1P28370 1054 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 IREB2P48200 963 aaKnown RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 SSRP1Q08945 709 aaKnown RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 FUT2Q10981 343 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 PRKG1Q13976 671 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 MAP3K11Q16584 847 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 USP17L2Q6R6M4 530 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 STAG2Q8N3U4 1231 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 SRBD1Q8N5C6 995 aaKnown RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 GMCL1P1Q8NEA9 526 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 ACER1Q8TDN7 264 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 DCAF4Q8WV16 495 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 ZKSCAN4Q969J2 545 aaPredicted RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 LZTS2Q9BRK4 669 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 ORC3Q9UBD5 711 aaPredicted RBP9.31□□□□□ -0.92
RBM28-206ENST00000487602 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 TMX2Q9Y320 296 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
RBM28-206ENST00000487602 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 F5H6K3 240 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 PRPF3O43395 683 aaKnown RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 GOLGA8HP0CJ92 632 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 PTPRAP18433 802 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 PDCP20941 246 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 SYT1P21579 422 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 ECE1P42892 770 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 NUCB2P80303 420 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 KLRC3Q07444 240 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 ZNF543Q08ER8 600 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 ASPRV1Q53RT3 343 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 GPATCH4Q5T3I0 446 aaKnown RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 LARP1BQ659C4 914 aaKnown RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 RASGRP2Q7LDG7 609 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 ARMC9Q7Z3E5 817 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 NBPF11Q86T75 865 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 CCDC84Q86UT8 332 aaPredicted RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 TRIM22Q8IYM9 498 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 CMTR1Q8N1G2 835 aaKnown RBP9.3□□□□□ -0.92
RBM28-206ENST00000487602 PHKBQ93100 1093 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 WDR18Q9BV38 432 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 SLC26A6Q9BXS9 759 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 SH2D4AQ9H788 454 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 AS3MTQ9HBK9 375 aa9.3□□□□□ -0.92
RBM28-206ENST00000487602 PICK1Q9NRD5 415 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms