RNA–Protein interactions for RNA: ENST00000487575.6

CBWD1-215, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-215ENST00000487575 SHMT1P34896 483 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
CBWD1-215ENST00000487575 FAM83AQ86UY5 434 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
CBWD1-215ENST00000487575 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 TRIM22Q8IYM9 498 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 CTCFLQ8NI51 663 aaPredicted RBP8.14□□□□□ -1.11
CBWD1-215ENST00000487575 WASF1Q92558 559 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 VEZTQ9HBM0 779 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 CNOT7Q9UIV1 285 aaKnown RBP8.14□□□□□ -1.11
CBWD1-215ENST00000487575 STX8Q9UNK0 236 aa8.14□□□□□ -1.11
CBWD1-215ENST00000487575 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 TOP1P11387 765 aaKnown RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 AKR1B1P15121 316 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 NOVP48745 357 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 TNNI2P48788 182 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 GPC2Q8N158 579 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 PNMA1Q8ND90 353 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 C8orf76Q96K31 380 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 CSRNP1Q96S65 589 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 TMEM47Q9BQJ4 181 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 ANP32EQ9BTT0 268 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 HERC5Q9UII4 1024 aaKnown RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 CNTNAP1P78357 1384 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 IGKV6D-41A0A0C4DH26 115 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 SHTN1A0MZ66 631 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 H7C1D1 291 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 GNAQP50148 359 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 AKAP17AQ02040 695 aaKnown RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 TNFAIP1Q13829 316 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 CERKLQ49MI3 558 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 TATDN1Q6P1N9 297 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 TMTC3Q6ZXV5 915 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 PHKBQ93100 1093 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 CEP95Q96GE4 821 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 L3MBTL3Q96JM7 780 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 ALG1Q9BT22 464 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 SLC26A6Q9BXS9 759 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-215ENST00000487575 DNAJC18Q9H819 358 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 MTMR4Q9NYA4 1195 aa8.13□□□□□ -1.11
CBWD1-215ENST00000487575 POTEMA6NI47 508 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 MPHOSPH10O00566 681 aaKnown RBP8.12□□□□□ -1.11
CBWD1-215ENST00000487575 DEXIO95424 95 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 TTLL1O95922 423 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 GRM4Q14833 912 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 KIF4BQ2VIQ3 1234 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 RBM26Q5T8P6 1007 aaKnown RBP8.12□□□□□ -1.11
CBWD1-215ENST00000487575 MCTP1Q6DN14 999 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 FBXO18Q8NFZ0 1043 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 RNF26Q9BY78 433 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-215ENST00000487575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.12□□□□□ -1.11
CBWD1-215ENST00000487575 RNF181Q9P0P0 153 aa8.12□□□□□ -1.11
CBWD1-215ENST00000487575 DICER1Q9UPY3 1922 aaKnown RBP8.12□□□□□ -1.11
CBWD1-215ENST00000487575 PRPF3O43395 683 aaKnown RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 TBC1D12O60347 775 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 FOSBP53539 338 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 FUT2Q10981 343 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 TRIM29Q14134 588 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 TBC1D10BQ4KMP7 808 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 SAMD7Q7Z3H4 446 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 TMEM39BQ9GZU3 492 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 KANSL2Q9H9L4 492 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 GPRC5DQ9NZD1 345 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 MYH8P13535 1937 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 SBF1O95248 1867 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 PLEKHA8P1O95397 391 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 EGFRP00533 1210 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 RESTQ13127 1097 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 ABCB5Q2M3G0 1257 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 FOXD4L6Q3SYB3 417 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 POTEGQ6S5H5 508 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 FOXD4L3Q6VB84 417 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-215ENST00000487575 TMEM179Q6ZVK1 233 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 CCDC82Q8N4S0 544 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 CABP5Q9NP86 173 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 CLIP2Q9UDT6 1046 aa8.11□□□□□ -1.11
CBWD1-215ENST00000487575 SIPA1L1O43166 1804 aa8.1□□□□□ -1.11
CBWD1-215ENST00000487575 PALM3A6NDB9 673 aaPredicted RBP8.1□□□□□ -1.11
CBWD1-215ENST00000487575 PARP1P09874 1014 aaKnown RBP8.1□□□□□ -1.11
CBWD1-215ENST00000487575 XBP1P17861 261 aa8.1□□□□□ -1.11
CBWD1-215ENST00000487575 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
CBWD1-215ENST00000487575 KRT85P78386 507 aa8.1□□□□□ -1.11
CBWD1-215ENST00000487575 GUCY1B3Q02153 619 aa8.1□□□□□ -1.11
CBWD1-215ENST00000487575 RASA3Q14644 834 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms