RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
ZNF541-204ENST00000487275 XBP1P17861 261 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 SEPT2Q15019 361 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 FOXD4L6Q3SYB3 417 aaPredicted RBP9.31□□□□□ -0.92
ZNF541-204ENST00000487275 DCAF15Q66K64 600 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 FOXD4L3Q6VB84 417 aaPredicted RBP9.31□□□□□ -0.92
ZNF541-204ENST00000487275 FERMT3Q86UX7 667 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 CLEC10AQ8IUN9 316 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 SRBD1Q8N5C6 995 aaKnown RBP9.31□□□□□ -0.92
ZNF541-204ENST00000487275 RGS22Q8NE09 1264 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 ZSCAN16Q9H4T2 348 aaPredicted RBP9.31□□□□□ -0.92
ZNF541-204ENST00000487275 NYAP2Q9P242 653 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 RBM27Q9P2N5 1060 aaKnown RBP9.31□□□□□ -0.92
ZNF541-204ENST00000487275 PGAP2Q9UHJ9 254 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 MAD2L2Q9UI95 211 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 PPP2R3BQ9Y5P8 575 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 CNTNAP5Q8WYK1 1306 aa9.31□□□□□ -0.92
ZNF541-204ENST00000487275 PALM3A6NDB9 673 aaPredicted RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 RAD21O60216 631 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 PDHBP11177 359 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 GUCY1A2P33402 732 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 FUT2Q10981 343 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 RESTQ13127 1097 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 GNL2Q13823 731 aaKnown RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 RRP1BQ14684 758 aaKnown RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 CCDC96Q2M329 555 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 SHROOM1Q2M3G4 852 aaPredicted RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 ASPRV1Q53RT3 343 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 KRT40Q6A162 431 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 OTUD7BQ6GQQ9 843 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 USP17L2Q6R6M4 530 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 FBXO18Q8NFZ0 1043 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 MKL1Q969V6 931 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 TEPSINQ96N21 525 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 AIFM3Q96NN9 605 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 ISY1Q9ULR0 285 aaKnown RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
ZNF541-204ENST00000487275 PITPNM2Q9BZ72 1349 aa9.3□□□□□ -0.92
ZNF541-204ENST00000487275 GLTPD2A6NH11 291 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 KLRF2D3W0D1 207 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 NCLP19338 710 aaKnown RBP9.29□□□□□ -0.92
ZNF541-204ENST00000487275 CAP2P40123 477 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 SAFBQ15424 915 aaKnown RBP eCLIP9.29□□□□□ -0.92
ZNF541-204ENST00000487275 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 NBPF12Q5TAG4 269 aaPredicted RBP9.29□□□□□ -0.92
ZNF541-204ENST00000487275 SLFN13Q68D06 897 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 USP50Q70EL3 339 aaPredicted RBP9.29□□□□□ -0.92
ZNF541-204ENST00000487275 DCAF4Q8WV16 495 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 PIBF1Q8WXW3 757 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
ZNF541-204ENST00000487275 ZNF341Q9BYN7 854 aa9.29□□□□□ -0.92
ZNF541-204ENST00000487275 FRMPD2Q68DX3 1309 aaPredicted RBP9.29□□□□□ -0.92
ZNF541-204ENST00000487275 hCG_1642624A0A1W2PR95 340 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 IQCA1LA6NCM1 817 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 UBE2Q2LH0YL09 131 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 ASNSP08243 561 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SNHG28P0DPA3 235 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SCG2P13521 617 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SMARCA1P28370 1054 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 EPHX2P34913 555 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SLC1A4P43007 532 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 KRT85P78386 507 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 JAG1P78504 1218 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 DNM1Q05193 864 aaKnown RBP9.28□□□□□ -0.92
ZNF541-204ENST00000487275 ZNF543Q08ER8 600 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 PKN1Q16512 942 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SUPT20HL1Q3ZLR7 823 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 GPATCH4Q5T3I0 446 aaKnown RBP9.28□□□□□ -0.92
ZNF541-204ENST00000487275 RASGRP2Q7LDG7 609 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 BRAPQ7Z569 592 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 USP48Q86UV5 1035 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SULF1Q8IWU6 871 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
ZNF541-204ENST00000487275 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SPZ1Q9BXG8 430 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SH2D4AQ9H788 454 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 GPCPD1Q9NPB8 672 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 GJB4Q9NTQ9 266 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 GINM1Q9NU53 330 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SEC63Q9UGP8 760 aaKnown RBP9.28□□□□□ -0.92
ZNF541-204ENST00000487275 SYNPO2Q9UMS6 1093 aa9.28□□□□□ -0.92
ZNF541-204ENST00000487275 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
ZNF541-204ENST00000487275 DCAF8L1A6NGE4 600 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 PHF20L1A8MW92 1017 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 F5H6K3 240 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 CTNND1O60716 968 aaKnown RBP9.27□□□□□ -0.93
ZNF541-204ENST00000487275 NDUFB10O96000 172 aa9.27□□□□□ -0.93
ZNF541-204ENST00000487275 MMP1P03956 469 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms