RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 IL25Q9H293 177 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 LOC285556D6RIA3 1793 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 GNRH1P01148 92 aa17.28■□□□□ 0.36
LIMS3-205ENST00000487150 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
LIMS3-205ENST00000487150 FAM110CQ1W6H9 321 aa17.28■□□□□ 0.36
LIMS3-205ENST00000487150 FAM47AQ5JRC9 791 aa17.28■□□□□ 0.36
LIMS3-205ENST00000487150 TCP11L1Q9NUJ3 509 aa17.28■□□□□ 0.36
LIMS3-205ENST00000487150 PHIPQ8WWQ0 1821 aa17.28■□□□□ 0.36
LIMS3-205ENST00000487150 MYPNQ86TC9 1320 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 A0A1W2PRG0 241 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 CYP2C8P10632 490 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 C17orf99Q6UX52 265 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
LIMS3-205ENST00000487150 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 MKL1Q969V6 931 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 RPAP3Q9H6T3 665 aaPredicted RBP17.27■□□□□ 0.36
LIMS3-205ENST00000487150 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 STX8Q9UNK0 236 aa17.27■□□□□ 0.36
LIMS3-205ENST00000487150 RBM8AQ9Y5S9 174 aaKnown RBP17.27■□□□□ 0.36
LIMS3-205ENST00000487150 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
LIMS3-205ENST00000487150 HERVK_113P62684 666 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 PTH1RQ03431 593 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 CTU1Q7Z7A3 348 aaKnown RBP17.26■□□□□ 0.35
LIMS3-205ENST00000487150 CLEC10AQ8IUN9 316 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 MB21D1Q8N884 522 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 TTC14Q96N46 770 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 NBPF3Q9H094 633 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 HOXC10Q9NYD6 342 aa17.26■□□□□ 0.35
LIMS3-205ENST00000487150 NEDD4P46934 1319 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 RAD21O60216 631 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 BCRP11274 1271 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 LACTBP83111 547 aaPredicted RBP17.25■□□□□ 0.35
LIMS3-205ENST00000487150 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
LIMS3-205ENST00000487150 LBX2Q6XYB7 198 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
LIMS3-205ENST00000487150 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 MYH8P13535 1937 aa17.25■□□□□ 0.35
LIMS3-205ENST00000487150 FLOT1O75955 427 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 TOP1P11387 765 aaKnown RBP17.24■□□□□ 0.35
LIMS3-205ENST00000487150 HOXD10P28358 340 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 NOVP48745 357 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 PRMT2P55345 433 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 FCGRTP55899 365 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 CCNA1P78396 465 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 COG2Q14746 738 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 NCOA7Q8NI08 942 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 GMCL1Q96IK5 515 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 R3HDMLQ9H3Y0 253 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
LIMS3-205ENST00000487150 PTPRFP10586 1907 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 GREB1LQ9C091 1923 aaPredicted RBP17.23■□□□□ 0.35
LIMS3-205ENST00000487150 ERICH2A1L162 156 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 F5H6K3 240 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 KDM4AO75164 1064 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 NDUFB10O96000 172 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 CYP21A2P08686 494 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
LIMS3-205ENST00000487150 KLRC3Q07444 240 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 DGKZQ13574 1117 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 DGKHQ86XP1 1220 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
LIMS3-205ENST00000487150 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 RABGAP1Q9Y3P9 1069 aa17.23■□□□□ 0.35
LIMS3-205ENST00000487150 B4E1Z4 1266 aa17.22■□□□□ 0.35
LIMS3-205ENST00000487150 KRT32Q14532 448 aa17.22■□□□□ 0.35
LIMS3-205ENST00000487150 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
LIMS3-205ENST00000487150 CCAR1Q8IX12 1150 aaKnown RBP17.22■□□□□ 0.35
LIMS3-205ENST00000487150 ANKRD13CQ8N6S4 541 aa17.22■□□□□ 0.35
LIMS3-205ENST00000487150 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
LIMS3-205ENST00000487150 SPDYE16A6NNV3 312 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-205ENST00000487150 FDX1P10109 184 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 SLC1A4P43007 532 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 CD99L2Q8TCZ2 262 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
LIMS3-205ENST00000487150 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
LIMS3-205ENST00000487150 MTA3Q9BTC8 594 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 FEM1BQ9UK73 627 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 TRIM17Q9Y577 477 aa17.21■□□□□ 0.35
LIMS3-205ENST00000487150 E7EWF7 191 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 SLC27A2O14975 620 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 BMP3P12645 472 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 MAPK4P31152 587 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 COPB2P35606 906 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 FAM160B2Q86V87 743 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
LIMS3-205ENST00000487150 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
LIMS3-205ENST00000487150 SLF1Q9BQI6 1058 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms