RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 FOXP1Q9H334 677 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 ARMT1Q9H993 441 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PPANQ9NQ55 473 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CHD1O14646 1710 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PPLO60437 1756 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 TULP2O00295 520 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PTPREP23469 700 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 AKNAD1Q5T1N1 836 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 RSRC2Q7L4I2 434 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 ANKS4BQ8N8V4 417 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 JPH2Q9BR39 696 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PUS7LQ9H0K6 701 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 LCMT1Q9UIC8 334 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PCDHB6Q9Y5E3 794 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 ABCA9Q8IUA7 1624 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 TSPY2A6NKD2 308 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PRR29P0C7W0 189 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CALML3P27482 149 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 DNM2P50570 870 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CLNS1AP54105 237 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PRPF4BQ13523 1007 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CFAP221Q4G0U5 840 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 RAD9BQ6WBX8 426 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 SELENOOQ9BVL4 669 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PUS3Q9BZE2 481 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 SEPT11Q9NVA2 429 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 SRPRBQ9Y5M8 271 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 NEO1Q92859 1461 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 MROH7-TTC4A0A0A0MT08 1334 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 SH2B2O14492 632 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 MMP1P03956 469 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CALM1P0DP23 149 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CALM2P0DP24 149 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CALM3P0DP25 149 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 TCP1P17987 556 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 ADORA1P30542 326 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 GUCY2FP51841 1108 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CORO7P57737 925 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 TYW1BQ6NUM6 668 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 KRT28Q7Z3Y7 464 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 RSRC1Q96IZ7 334 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 NOX5Q96PH1 765 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 DLC1Q96QB1 1528 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 TMEM2Q9UHN6 1383 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 NRKQ7Z2Y5 1582 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 SRGAP2O75044 1071 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 GUCY2CP25092 1073 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 PDE4BQ07343 736 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 PDE4DQ08499 809 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 C2orf54Q08AI8 447 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 KRT31Q15323 416 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 ZNF654Q8IZM8 581 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 COG1Q8WTW3 980 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 PNKPQ96T60 521 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 IQSEC3Q9UPP2 1182 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 HYOU1Q9Y4L1 999 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 GOLGA6L10A0A0M3HER8 536 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 USP14P54578 494 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 IFI16Q16666 785 aaKnown RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 FAM43BQ6ZT52 329 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 C2CD5Q86YS7 1000 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 CCDC50Q8IVM0 306 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 GSPT2Q8IYD1 628 aaKnown RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 FANCBQ8NB91 859 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 UBLCP1Q8WVY7 318 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 RAB34Q9BZG1 259 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 GCOM1H8Y6P7 765 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 MPHOSPH10O00566 681 aaKnown RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 GTPBP6O43824 516 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 MYZAPP0CAP1 466 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 IFNAR1P17181 557 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 LTKP29376 864 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 EPHB4P54760 987 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 IFT88Q13099 833 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 MB21D2Q8IYB1 491 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 EPSTI1Q96J88 318 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 SPAG5Q96R06 1193 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 KAT14Q9H8E8 782 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 MKNK2Q9HBH9 465 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 PRDM11Q9NQV5 511 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 RBM28Q9NW13 759 aaKnown RBP8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 CDC42BPGQ6DT37 1551 aa8.55□□□□□ -1.04
COL6A4P1-202ENST00000487147 SEMA3EO15041 775 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 A1BGP04217 495 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 CASP1P29466 404 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 CHRNA2Q15822 529 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 TMEM266Q2M3C6 531 aa8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 NOA1Q8NC60 698 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 RIN2Q8WYP3 895 aaPredicted RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 FAM207AQ9NSI2 230 aaPredicted RBP8.54□□□□□ -1.04
COL6A4P1-202ENST00000487147 TMOD3Q9NYL9 352 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms