RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CCDC171Q6TFL3 1326 aa26.65■■□□□ 1.86
CDHR3-212ENST00000487084 CTDSPL2Q05D32 466 aa26.64■■□□□ 1.86
CDHR3-212ENST00000487084 CWC27Q6UX04 472 aaKnown RBP26.64■■□□□ 1.86
CDHR3-212ENST00000487084 LPAR1Q92633 364 aa26.64■■□□□ 1.86
CDHR3-212ENST00000487084 ZNF333Q96JL9 665 aa26.64■■□□□ 1.86
CDHR3-212ENST00000487084 RBPJLQ9UBG7 517 aa26.64■■□□□ 1.86
CDHR3-212ENST00000487084 FLT3LGP49771 235 aa26.63■■□□□ 1.85
CDHR3-212ENST00000487084 ERVK-9P63128 1117 aa26.63■■□□□ 1.85
CDHR3-212ENST00000487084 ERVK-24P63145 666 aa26.63■■□□□ 1.85
CDHR3-212ENST00000487084 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
CDHR3-212ENST00000487084 CCAR1Q8IX12 1150 aaKnown RBP26.63■■□□□ 1.85
CDHR3-212ENST00000487084 MGAMO43451 1857 aa26.63■■□□□ 1.85
CDHR3-212ENST00000487084 HIP1O00291 1037 aa26.62■■□□□ 1.85
CDHR3-212ENST00000487084 HSPD1P10809 573 aaKnown RBP26.62■■□□□ 1.85
CDHR3-212ENST00000487084 MFAP1P55081 439 aaKnown RBP26.62■■□□□ 1.85
CDHR3-212ENST00000487084 SAMD1Q6SPF0 538 aaPredicted RBP26.62■■□□□ 1.85
CDHR3-212ENST00000487084 GOPCQ9HD26 462 aa26.62■■□□□ 1.85
CDHR3-212ENST00000487084 BIN2Q9UBW5 565 aaPredicted RBP26.62■■□□□ 1.85
CDHR3-212ENST00000487084 SPDYE16A6NNV3 312 aaPredicted RBP26.61■■□□□ 1.85
CDHR3-212ENST00000487084 TSPY3P0CV98 308 aa26.61■■□□□ 1.85
CDHR3-212ENST00000487084 TSPY8P0CW00 308 aa26.61■■□□□ 1.85
CDHR3-212ENST00000487084 GSPT1P15170 499 aaKnown RBP26.61■■□□□ 1.85
CDHR3-212ENST00000487084 GRK4P32298 578 aa26.61■■□□□ 1.85
CDHR3-212ENST00000487084 FAM47AQ5JRC9 791 aa26.61■■□□□ 1.85
CDHR3-212ENST00000487084 CWC22Q9HCG8 908 aaKnown RBP26.61■■□□□ 1.85
CDHR3-212ENST00000487084 FLOT1O75955 427 aa26.6■■□□□ 1.85
CDHR3-212ENST00000487084 RGS19P49795 217 aa26.6■■□□□ 1.85
CDHR3-212ENST00000487084 ALX1Q15699 326 aa26.6■■□□□ 1.85
CDHR3-212ENST00000487084 Q3C1V9 767 aa26.6■■□□□ 1.85
CDHR3-212ENST00000487084 POTEEQ6S8J3 1075 aa26.6■■□□□ 1.85
CDHR3-212ENST00000487084 RABGAP1Q9Y3P9 1069 aa26.6■■□□□ 1.85
CDHR3-212ENST00000487084 WDR46O15213 610 aaKnown RBP26.59■■□□□ 1.85
CDHR3-212ENST00000487084 ADCY3O60266 1144 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 CNMDO75829 334 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 FGAP02671 866 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 TFAP4Q01664 338 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 MLLT1Q03111 559 aaPredicted RBP26.59■■□□□ 1.85
CDHR3-212ENST00000487084 COG2Q14746 738 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 CEP95Q96GE4 821 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 TMEM106CQ9BVX2 250 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 INCENPQ9NQS7 918 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 NYAP2Q9P242 653 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 CLIP2Q9UDT6 1046 aa26.59■■□□□ 1.85
CDHR3-212ENST00000487084 MAPK4P31152 587 aa26.58■■□□□ 1.85
CDHR3-212ENST00000487084 SLAIN1Q8ND83 568 aa26.58■■□□□ 1.85
CDHR3-212ENST00000487084 PORCNQ9H237 461 aa26.58■■□□□ 1.85
CDHR3-212ENST00000487084 TOMM22Q9NS69 142 aa26.58■■□□□ 1.85
CDHR3-212ENST00000487084 HOXC10Q9NYD6 342 aa26.58■■□□□ 1.85
CDHR3-212ENST00000487084 GREB1LQ9C091 1923 aaPredicted RBP26.58■■□□□ 1.85
CDHR3-212ENST00000487084 IGKV6D-41A0A0C4DH26 115 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 POTEFA5A3E0 1075 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 TSPY2A6NKD2 308 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 ELNP15502 786 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 HAND2P61296 217 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 CCNA1P78396 465 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 WDR78Q5VTH9 848 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 LBX2Q6XYB7 198 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 NEDD1Q8NHV4 660 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 MTMR4Q9NYA4 1195 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 BTBD7Q9P203 1132 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 ANAPC4Q9UJX5 808 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.57■■□□□ 1.84
CDHR3-212ENST00000487084 PLIN4Q96Q06 1357 aa26.57■■□□□ 1.84
CDHR3-212ENST00000487084 IRF5Q13568 498 aa26.56■■□□□ 1.84
CDHR3-212ENST00000487084 FAM83BQ5T0W9 1011 aa26.56■■□□□ 1.84
CDHR3-212ENST00000487084 RANBP6O60518 1105 aaKnown RBP26.55■■□□□ 1.84
CDHR3-212ENST00000487084 TTLL1O95922 423 aa26.55■■□□□ 1.84
CDHR3-212ENST00000487084 DSG3P32926 999 aa26.55■■□□□ 1.84
CDHR3-212ENST00000487084 UBXN2AP68543 259 aa26.55■■□□□ 1.84
CDHR3-212ENST00000487084 RRP12Q5JTH9 1297 aaKnown RBP26.55■■□□□ 1.84
CDHR3-212ENST00000487084 LRRC47Q8N1G4 583 aaKnown RBP26.55■■□□□ 1.84
CDHR3-212ENST00000487084 ATG4CQ96DT6 458 aa26.55■■□□□ 1.84
CDHR3-212ENST00000487084 TACC3Q9Y6A5 838 aa26.55■■□□□ 1.84
CDHR3-212ENST00000487084 ZMYM6O95789 1325 aa26.55■■□□□ 1.84
CDHR3-212ENST00000487084 CENPFP49454 3210 aa26.54■■□□□ 1.84
CDHR3-212ENST00000487084 MTFR1Q15390 333 aa26.54■■□□□ 1.84
CDHR3-212ENST00000487084 GPR142Q7Z601 462 aa26.54■■□□□ 1.84
CDHR3-212ENST00000487084 PLEKHH3Q7Z736 793 aa26.54■■□□□ 1.84
CDHR3-212ENST00000487084 NUP88Q99567 741 aaPredicted RBP26.54■■□□□ 1.84
CDHR3-212ENST00000487084 F5H6K3 240 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 NDUFB10O96000 172 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 KLRC3Q07444 240 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 PLS1Q14651 629 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 PXYLP1Q8TE99 480 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 SOCS4Q8WXH5 440 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 NUDT12Q9BQG2 462 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 FBXO28Q9NVF7 368 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 GJD2Q9UKL4 321 aa26.53■■□□□ 1.84
CDHR3-212ENST00000487084 ORC4O43929 436 aa26.52■■□□□ 1.84
CDHR3-212ENST00000487084 CYP2B6P20813 491 aa26.52■■□□□ 1.84
CDHR3-212ENST00000487084 CENPQQ7L2Z9 268 aaPredicted RBP26.52■■□□□ 1.84
CDHR3-212ENST00000487084 DOCK3Q8IZD9 2030 aa26.52■■□□□ 1.84
CDHR3-212ENST00000487084 MB21D1Q8N884 522 aa26.52■■□□□ 1.84
CDHR3-212ENST00000487084 INHAP05111 366 aa26.51■■□□□ 1.83
CDHR3-212ENST00000487084 ISY1Q9ULR0 285 aaKnown RBP26.51■■□□□ 1.83
CDHR3-212ENST00000487084 STX8Q9UNK0 236 aa26.51■■□□□ 1.83
CDHR3-212ENST00000487084 KIAA0100Q14667 2235 aaKnown RBP26.51■■□□□ 1.83
CDHR3-212ENST00000487084 NMT2O60551 498 aa26.5■■□□□ 1.83
CDHR3-212ENST00000487084 CCL5P13501 91 aa26.5■■□□□ 1.83
CDHR3-212ENST00000487084 EN2P19622 333 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms