RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 HAND2P61296 217 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 TFAP4Q01664 338 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 FAM47AQ5JRC9 791 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 ERICH6BQ5W0A0 696 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 TRIM47Q96LD4 638 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 GOPCQ9HD26 462 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 MORF4L1Q9UBU8 362 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 HPS5Q9UPZ3 1129 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 PTPN22Q9Y2R2 807 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 LAMA4Q16363 1823 aa21.59■■□□□ 1.05
COL1A1-207ENST00000486572 FMNL1O95466 1100 aaPredicted RBP21.58■■□□□ 1.05
COL1A1-207ENST00000486572 FGRP09769 529 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 KIAA1755Q5JYT7 1200 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 SPICE1Q8N0Z3 855 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 CEP95Q96GE4 821 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 TANGO6Q9C0B7 1094 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 INCENPQ9NQS7 918 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 MTMR4Q9NYA4 1195 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 TACC3Q9Y6A5 838 aa21.58■■□□□ 1.05
COL1A1-207ENST00000486572 TSPY2A6NKD2 308 aa21.57■■□□□ 1.04
COL1A1-207ENST00000486572 WDR46O15213 610 aaKnown RBP21.57■■□□□ 1.04
COL1A1-207ENST00000486572 PCP11498 1178 aaKnown RBP21.57■■□□□ 1.04
COL1A1-207ENST00000486572 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
COL1A1-207ENST00000486572 NBPF3Q9H094 633 aa21.57■■□□□ 1.04
COL1A1-207ENST00000486572 TOMM22Q9NS69 142 aa21.57■■□□□ 1.04
COL1A1-207ENST00000486572 MGAMO43451 1857 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 ZNF213O14771 459 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 RANBP6O60518 1105 aaKnown RBP21.56■■□□□ 1.04
COL1A1-207ENST00000486572 CAPN15O75808 1086 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 TTLL1O95922 423 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 PRMT2P55345 433 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 TBC1D10CQ8IV04 446 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 STAG1Q8WVM7 1258 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 TXNRD2Q9NNW7 524 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 CLIP2Q9UDT6 1046 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 CTNNA3Q9UI47 895 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 SYNPO2Q9UMS6 1093 aa21.56■■□□□ 1.04
COL1A1-207ENST00000486572 TNPO2O14787 897 aaKnown RBP21.55■■□□□ 1.04
COL1A1-207ENST00000486572 SGSM2O43147 1006 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 RAD21O60216 631 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 HOXD10P28358 340 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 PPP4R3BQ5MIZ7 849 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 AKNAD1Q5T1N1 836 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 LBX2Q6XYB7 198 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 MFSD6Q6ZSS7 791 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 GPRC5AQ8NFJ5 357 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 PAGR1Q9BTK6 254 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
COL1A1-207ENST00000486572 PPP4R2Q9NY27 417 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 RBPJLQ9UBG7 517 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 SRRDQ9UH36 339 aa21.55■■□□□ 1.04
COL1A1-207ENST00000486572 SPDYE16A6NNV3 312 aaPredicted RBP21.54■■□□□ 1.04
COL1A1-207ENST00000486572 COG2Q14746 738 aa21.54■■□□□ 1.04
COL1A1-207ENST00000486572 IMMTQ16891 758 aaKnown RBP21.54■■□□□ 1.04
COL1A1-207ENST00000486572 RRP12Q5JTH9 1297 aaKnown RBP21.54■■□□□ 1.04
COL1A1-207ENST00000486572 MKL1Q969V6 931 aa21.54■■□□□ 1.04
COL1A1-207ENST00000486572 RABGAP1Q9Y3P9 1069 aa21.54■■□□□ 1.04
COL1A1-207ENST00000486572 PTCH2Q9Y6C5 1203 aa21.54■■□□□ 1.04
COL1A1-207ENST00000486572 MYH4Q9Y623 1939 aa21.54■■□□□ 1.04
COL1A1-207ENST00000486572 MYPNQ86TC9 1320 aa21.54■■□□□ 1.04
COL1A1-207ENST00000486572 CCDC85CA6NKD9 419 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 PEX10O60683 326 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 FLOT1O75955 427 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 ERVK-9P63128 1117 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 ERVK-24P63145 666 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 POTEEQ6S8J3 1075 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 HOXC10Q9NYD6 342 aa21.53■■□□□ 1.04
COL1A1-207ENST00000486572 A0A0G2JMZ2 1700 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 F5H6K3 240 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 NDUFB10O96000 172 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 KLRC3Q07444 240 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 LRRC47Q8N1G4 583 aaKnown RBP21.52■■□□□ 1.04
COL1A1-207ENST00000486572 COA7Q96BR5 231 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 IL17RBQ9NRM6 502 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 STX8Q9UNK0 236 aa21.52■■□□□ 1.04
COL1A1-207ENST00000486572 NEDD4P46934 1319 aa21.52■■□□□ 1.03
COL1A1-207ENST00000486572 RLFQ13129 1914 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 NMT2O60551 498 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 CNMDO75829 334 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 NT5C2P49902 561 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 PRKCZQ05513 592 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 FAM83BQ5T0W9 1011 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 GMCL1P1Q8NEA9 526 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 ESR2Q92731 530 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 HTTP42858 3142 aa21.51■■□□□ 1.03
COL1A1-207ENST00000486572 PARP14Q460N5 1801 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 DSG3P32926 999 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 CCNA1P78396 465 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 PTH1RQ03431 593 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 SLC9C1Q4G0N8 1177 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 RAET1EQ8TD07 263 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 NUP88Q99567 741 aaPredicted RBP21.5■■□□□ 1.03
COL1A1-207ENST00000486572 BTBD7Q9P203 1132 aa21.5■■□□□ 1.03
COL1A1-207ENST00000486572 MAPK4P31152 587 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 NOVP48745 357 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 Q3C1V9 767 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 CCAR1Q8IX12 1150 aaKnown RBP21.49■■□□□ 1.03
COL1A1-207ENST00000486572 MB21D1Q8N884 522 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 ARMC5Q96C12 935 aa21.49■■□□□ 1.03
COL1A1-207ENST00000486572 ATG4CQ96DT6 458 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms