RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 CCDC17Q96LX7 622 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 HOXC10Q9NYD6 342 aa26.98■■□□□ 1.91
SREBF1-214ENST00000486311 SLC15A5A6NIM6 579 aa26.97■■□□□ 1.91
SREBF1-214ENST00000486311 SMIM22K7EJ46 135 aa26.97■■□□□ 1.91
SREBF1-214ENST00000486311 PTPREP23469 700 aa26.97■■□□□ 1.91
SREBF1-214ENST00000486311 CDK8P49336 464 aa26.97■■□□□ 1.91
SREBF1-214ENST00000486311 C16orf86Q6ZW13 317 aa26.97■■□□□ 1.91
SREBF1-214ENST00000486311 ICA1Q05084 483 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 KIAA1755Q5JYT7 1200 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 WDR78Q5VTH9 848 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 LPAR1Q92633 364 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 NBPF3Q9H094 633 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 PRO3102Q9H379 93 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 SH2D4AQ9H788 454 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 ARHGEF10LQ9HCE6 1279 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 RBM27Q9P2N5 1060 aaKnown RBP26.96■■□□□ 1.91
SREBF1-214ENST00000486311 TMX2Q9Y320 296 aa26.96■■□□□ 1.91
SREBF1-214ENST00000486311 TRIOBPQ9H2D6 2365 aa26.95■■□□□ 1.91
SREBF1-214ENST00000486311 GRB14Q14449 540 aa26.95■■□□□ 1.9
SREBF1-214ENST00000486311 CTR9Q6PD62 1173 aa26.95■■□□□ 1.9
SREBF1-214ENST00000486311 GPATCH3Q96I76 525 aa26.95■■□□□ 1.9
SREBF1-214ENST00000486311 TANGO6Q9C0B7 1094 aa26.95■■□□□ 1.9
SREBF1-214ENST00000486311 HOXC6P09630 235 aa26.94■■□□□ 1.9
SREBF1-214ENST00000486311 CLEC10AQ8IUN9 316 aa26.94■■□□□ 1.9
SREBF1-214ENST00000486311 KBTBD3Q8NAB2 608 aa26.94■■□□□ 1.9
SREBF1-214ENST00000486311 IVNS1ABPQ9Y6Y0 642 aa26.94■■□□□ 1.9
SREBF1-214ENST00000486311 CCND3P30281 292 aaPredicted RBP26.93■■□□□ 1.9
SREBF1-214ENST00000486311 STRBPQ96SI9 672 aaKnown RBP26.93■■□□□ 1.9
SREBF1-214ENST00000486311 C11orf49Q9H6J7 331 aa26.93■■□□□ 1.9
SREBF1-214ENST00000486311 VCPKMTQ9H867 229 aa26.93■■□□□ 1.9
SREBF1-214ENST00000486311 LHX8Q68G74 356 aa26.92■■□□□ 1.9
SREBF1-214ENST00000486311 MB21D1Q8N884 522 aa26.92■■□□□ 1.9
SREBF1-214ENST00000486311 MOV10L1Q9BXT6 1211 aaKnown RBP26.92■■□□□ 1.9
SREBF1-214ENST00000486311 FLRT1Q9NZU1 646 aa26.92■■□□□ 1.9
SREBF1-214ENST00000486311 ARPP21Q9UBL0 812 aaPredicted RBP26.92■■□□□ 1.9
SREBF1-214ENST00000486311 DSG3P32926 999 aa26.91■■□□□ 1.9
SREBF1-214ENST00000486311 MFSD14CQ5VZR4 134 aa26.91■■□□□ 1.9
SREBF1-214ENST00000486311 TSHZ3Q63HK5 1081 aa26.91■■□□□ 1.9
SREBF1-214ENST00000486311 SHCBP1Q8NEM2 672 aa26.91■■□□□ 1.9
SREBF1-214ENST00000486311 SPATC1LQ9H0A9 340 aa26.91■■□□□ 1.9
SREBF1-214ENST00000486311 SBK1Q52WX2 424 aa26.9■■□□□ 1.9
SREBF1-214ENST00000486311 GIMAP6Q6P9H5 292 aa26.9■■□□□ 1.9
SREBF1-214ENST00000486311 SPICE1Q8N0Z3 855 aa26.9■■□□□ 1.9
SREBF1-214ENST00000486311 APPBP2Q92624 585 aa26.9■■□□□ 1.9
SREBF1-214ENST00000486311 KANSL2Q9H9L4 492 aa26.9■■□□□ 1.9
SREBF1-214ENST00000486311 WDR46O15213 610 aaKnown RBP26.89■■□□□ 1.9
SREBF1-214ENST00000486311 RNF113AO15541 343 aaKnown RBP26.89■■□□□ 1.9
SREBF1-214ENST00000486311 STRNO43815 780 aa26.89■■□□□ 1.9
SREBF1-214ENST00000486311 FLOT1O75955 427 aa26.89■■□□□ 1.9
SREBF1-214ENST00000486311 EEF2P13639 858 aaKnown RBP26.89■■□□□ 1.9
SREBF1-214ENST00000486311 NPLOC4Q8TAT6 608 aa26.89■■□□□ 1.9
SREBF1-214ENST00000486311 OSBP2Q969R2 916 aa26.89■■□□□ 1.9
SREBF1-214ENST00000486311 PCDHB15Q9Y5E8 787 aa26.89■■□□□ 1.9
SREBF1-214ENST00000486311 GSG1L2A8MUP6 293 aa26.88■■□□□ 1.89
SREBF1-214ENST00000486311 IGHA2P01877 340 aa26.88■■□□□ 1.89
SREBF1-214ENST00000486311 ZFYP08048 801 aaPredicted RBP26.88■■□□□ 1.89
SREBF1-214ENST00000486311 ATP2B2Q01814 1243 aa26.88■■□□□ 1.89
SREBF1-214ENST00000486311 COL6A1P12109 1028 aa26.87■■□□□ 1.89
SREBF1-214ENST00000486311 ERCC3P19447 782 aa26.87■■□□□ 1.89
SREBF1-214ENST00000486311 ATG4CQ96DT6 458 aa26.87■■□□□ 1.89
SREBF1-214ENST00000486311 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.87■■□□□ 1.89
SREBF1-214ENST00000486311 PFASO15067 1338 aa26.87■■□□□ 1.89
SREBF1-214ENST00000486311 ADORA2AP29274 412 aa26.86■■□□□ 1.89
SREBF1-214ENST00000486311 C7orf61Q8IZ16 206 aa26.86■■□□□ 1.89
SREBF1-214ENST00000486311 MROH8Q9H579 483 aa26.86■■□□□ 1.89
SREBF1-214ENST00000486311 SZT2Q5T011 3432 aa26.86■■□□□ 1.89
SREBF1-214ENST00000486311 ALPK3Q96L96 1907 aa26.86■■□□□ 1.89
SREBF1-214ENST00000486311 TTC41PQ6P2S7 1318 aa26.86■■□□□ 1.89
SREBF1-214ENST00000486311 BAZ2AQ9UIF9 1905 aaKnown RBP26.85■■□□□ 1.89
SREBF1-214ENST00000486311 A0A1W2PPC1 479 aa26.85■■□□□ 1.89
SREBF1-214ENST00000486311 DPP9Q86TI2 863 aa26.85■■□□□ 1.89
SREBF1-214ENST00000486311 ROBO3Q96MS0 1386 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 GPAA1O43292 621 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 GNAT2P19087 354 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 CYP2C19P33261 490 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 PLS1Q14651 629 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 OLFML2BQ68BL8 750 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 ABRAQ8N0Z2 381 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 GOPCQ9HD26 462 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 STAP2Q9UGK3 403 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 DDX20Q9UHI6 824 aaKnown RBP26.84■■□□□ 1.89
SREBF1-214ENST00000486311 ADAMTS5Q9UNA0 930 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 A0A0G2JMZ2 1700 aa26.84■■□□□ 1.89
SREBF1-214ENST00000486311 MYH7P12883 1935 aa26.83■■□□□ 1.89
SREBF1-214ENST00000486311 MSCO60682 206 aa26.83■■□□□ 1.89
SREBF1-214ENST00000486311 RASA1P20936 1047 aa26.83■■□□□ 1.89
SREBF1-214ENST00000486311 TMEM132BQ14DG7 1078 aa26.83■■□□□ 1.89
SREBF1-214ENST00000486311 LRRFIP1Q32MZ4 808 aaKnown RBP26.83■■□□□ 1.89
SREBF1-214ENST00000486311 PI4K2BQ8TCG2 481 aa26.83■■□□□ 1.89
SREBF1-214ENST00000486311 MKNK2Q9HBH9 465 aa26.83■■□□□ 1.89
SREBF1-214ENST00000486311 EPB41L4AQ9HCS5 686 aaPredicted RBP26.83■■□□□ 1.89
SREBF1-214ENST00000486311 RLFQ13129 1914 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 MINDY4BA8MYZ0 360 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 M0R2C6 588 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 ERC2O15083 957 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 COBLO75128 1261 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 NCAPG2Q86XI2 1143 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 TRPV1Q8NER1 839 aa26.82■■□□□ 1.88
SREBF1-214ENST00000486311 ZMYND8Q9ULU4 1186 aaPredicted RBP26.82■■□□□ 1.88
SREBF1-214ENST00000486311 SLC25A27O95847 323 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms