RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 USP17L18D6R9N7 530 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 USP17L22D6RA61 530 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 USP17L17D6RBQ6 530 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 USP17L19D6RCP7 530 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 USP17L20D6RJB6 530 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 IGHA2P01877 340 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 PTPREP23469 700 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 ATN1P54259 1190 aaPredicted RBP21.21■□□□□ 0.99
MCF2L-226ENST00000486210 USP17L24Q0WX57 530 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 MFSD14CQ5VZR4 134 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 CERS3Q8IU89 383 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 TRPV1Q8NER1 839 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.21■□□□□ 0.99
MCF2L-226ENST00000486210 GPATCH3Q96I76 525 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 CWC22Q9HCG8 908 aaKnown RBP21.21■□□□□ 0.99
MCF2L-226ENST00000486210 TTC41PQ6P2S7 1318 aa21.21■□□□□ 0.99
MCF2L-226ENST00000486210 LAMA2P24043 3122 aaKnown RBP21.21■□□□□ 0.99
MCF2L-226ENST00000486210 SLC15A5A6NIM6 579 aa21.2■□□□□ 0.98
MCF2L-226ENST00000486210 HOXC6P09630 235 aa21.2■□□□□ 0.98
MCF2L-226ENST00000486210 GRB14Q14449 540 aa21.2■□□□□ 0.98
MCF2L-226ENST00000486210 ACER1Q8TDN7 264 aa21.2■□□□□ 0.98
MCF2L-226ENST00000486210 LPAR1Q92633 364 aa21.2■□□□□ 0.98
MCF2L-226ENST00000486210 ANTXR1Q9H6X2 564 aa21.2■□□□□ 0.98
MCF2L-226ENST00000486210 EYSQ5T1H1 3165 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 IDH1O75874 414 aaKnown RBP21.19■□□□□ 0.98
MCF2L-226ENST00000486210 VCAM1P19320 739 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 CYP7A1P22680 504 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 CYP2C19P33261 490 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 CCNA1P78396 465 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 WDR78Q5VTH9 848 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 LBX2Q6XYB7 198 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 DNAJC2Q99543 621 aaKnown RBP21.19■□□□□ 0.98
MCF2L-226ENST00000486210 FEZ1Q99689 392 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 VCANP13611 3396 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 ZNF236Q9UL36 1845 aa21.19■□□□□ 0.98
MCF2L-226ENST00000486210 DNM1LO00429 736 aa21.18■□□□□ 0.98
MCF2L-226ENST00000486210 GLRX3O76003 335 aaKnown RBP21.18■□□□□ 0.98
MCF2L-226ENST00000486210 CNGA1P29973 690 aa21.18■□□□□ 0.98
MCF2L-226ENST00000486210 RTP1P59025 263 aa21.18■□□□□ 0.98
MCF2L-226ENST00000486210 HAUS7Q99871 368 aa21.18■□□□□ 0.98
MCF2L-226ENST00000486210 LBHD1Q9BQE6 289 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-226ENST00000486210 KIAA1683Q9H0B3 1180 aa21.18■□□□□ 0.98
MCF2L-226ENST00000486210 SPDYE16A6NNV3 312 aaPredicted RBP21.17■□□□□ 0.98
MCF2L-226ENST00000486210 MSCO60682 206 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 CYBAP13498 195 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 USP5P45974 858 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 ATP2B2Q01814 1243 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 MAP3K12Q12852 859 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 TMED8Q6PL24 325 aaPredicted RBP21.17■□□□□ 0.98
MCF2L-226ENST00000486210 MIGA1Q8NAN2 632 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 EHD4Q9H223 541 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 A0A0G2JMZ2 1700 aa21.17■□□□□ 0.98
MCF2L-226ENST00000486210 GOLIM4O00461 696 aa21.16■□□□□ 0.98
MCF2L-226ENST00000486210 ERC2O15083 957 aa21.16■□□□□ 0.98
MCF2L-226ENST00000486210 GUCY1A2P33402 732 aa21.16■□□□□ 0.98
MCF2L-226ENST00000486210 USP14P54578 494 aa21.16■□□□□ 0.98
MCF2L-226ENST00000486210 SERPINB13Q9UIV8 391 aa21.16■□□□□ 0.98
MCF2L-226ENST00000486210 SPTBN5Q9NRC6 3674 aaKnown RBP21.16■□□□□ 0.98
MCF2L-226ENST00000486210 CDH23Q9H251 3354 aa21.16■□□□□ 0.98
MCF2L-226ENST00000486210 CERKLQ49MI3 558 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-226ENST00000486210 GJC2Q5T442 439 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-226ENST00000486210 ZNF697Q5TEC3 545 aa21.15■□□□□ 0.98
MCF2L-226ENST00000486210 RPAP3Q9H6T3 665 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-226ENST00000486210 IVNS1ABPQ9Y6Y0 642 aa21.15■□□□□ 0.98
MCF2L-226ENST00000486210 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 SHMT1P34896 483 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 PLCD1P51178 756 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 SHHQ15465 462 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 ABCB5Q2M3G0 1257 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 C9orf50Q5SZB4 431 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 SLC39A5Q6ZMH5 540 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 MAGEB6Q8N7X4 407 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 CDX2Q99626 313 aaPredicted RBP21.14■□□□□ 0.97
MCF2L-226ENST00000486210 PAG1Q9NWQ8 432 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 ATP11BQ9Y2G3 1177 aa21.14■□□□□ 0.97
MCF2L-226ENST00000486210 ANO1Q5XXA6 986 aa21.13■□□□□ 0.97
MCF2L-226ENST00000486210 PRKAG2Q9UGJ0 569 aa21.13■□□□□ 0.97
MCF2L-226ENST00000486210 GSPT1P15170 499 aaKnown RBP21.12■□□□□ 0.97
MCF2L-226ENST00000486210 EVX2Q03828 476 aa21.12■□□□□ 0.97
MCF2L-226ENST00000486210 TTF1Q15361 905 aaPredicted RBP21.12■□□□□ 0.97
MCF2L-226ENST00000486210 MOV10L1Q9BXT6 1211 aaKnown RBP21.12■□□□□ 0.97
MCF2L-226ENST00000486210 PARP14Q460N5 1801 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 A0A1W2PRG0 241 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 ADORA2AP29274 412 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 SEPT2Q15019 361 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 SNX17Q15036 470 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 TTC22Q5TAA0 569 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 OLFML2BQ68BL8 750 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 TTC6Q86TZ1 520 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 SEMA6BQ9H3T3 888 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 CABP5Q9NP86 173 aa21.11■□□□□ 0.97
MCF2L-226ENST00000486210 ZNFX1Q9P2E3 1918 aaKnown RBP21.1■□□□□ 0.97
MCF2L-226ENST00000486210 COBLO75128 1261 aa21.1■□□□□ 0.97
MCF2L-226ENST00000486210 GABPAQ06546 454 aa21.1■□□□□ 0.97
MCF2L-226ENST00000486210 TRIM60Q495X7 471 aa21.1■□□□□ 0.97
MCF2L-226ENST00000486210 SH3RF1Q7Z6J0 888 aa21.1■□□□□ 0.97
MCF2L-226ENST00000486210 DPP9Q86TI2 863 aa21.1■□□□□ 0.97
MCF2L-226ENST00000486210 BADQ92934 168 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms