RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 TRPV1Q8NER1 839 aa19.62■□□□□ 0.73
PDE6D-205ENST00000486044 GUCD1Q96NT3 240 aa19.62■□□□□ 0.73
PDE6D-205ENST00000486044 RIOK1Q9BRS2 568 aaKnown RBP19.62■□□□□ 0.73
PDE6D-205ENST00000486044 SPATC1LQ9H0A9 340 aa19.62■□□□□ 0.73
PDE6D-205ENST00000486044 ANTXR1Q9H6X2 564 aa19.62■□□□□ 0.73
PDE6D-205ENST00000486044 SEPT4O43236 478 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 IGHA2P01877 340 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 GUCY1A2P33402 732 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 ITPRIPQ8IWB1 547 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 FAM161BQ96MY7 647 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 COL25A1Q9BXS0 654 aaPredicted RBP19.61■□□□□ 0.73
PDE6D-205ENST00000486044 MROH8Q9H579 483 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
PDE6D-205ENST00000486044 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
PDE6D-205ENST00000486044 ERCC3P19447 782 aa19.6■□□□□ 0.73
PDE6D-205ENST00000486044 GABPAQ06546 454 aa19.6■□□□□ 0.73
PDE6D-205ENST00000486044 AACSQ86V21 672 aa19.6■□□□□ 0.73
PDE6D-205ENST00000486044 ABRAQ8N0Z2 381 aa19.6■□□□□ 0.73
PDE6D-205ENST00000486044 PRDM5Q9NQX1 630 aaPredicted RBP19.6■□□□□ 0.73
PDE6D-205ENST00000486044 PLS1Q14651 629 aa19.59■□□□□ 0.73
PDE6D-205ENST00000486044 HSP90AB4PQ58FF6 505 aa19.59■□□□□ 0.73
PDE6D-205ENST00000486044 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
PDE6D-205ENST00000486044 TMEM179Q6ZVK1 233 aa19.59■□□□□ 0.73
PDE6D-205ENST00000486044 ZNF236Q9UL36 1845 aa19.58■□□□□ 0.73
PDE6D-205ENST00000486044 A0A1W2PRG0 241 aa19.58■□□□□ 0.72
PDE6D-205ENST00000486044 SHHQ15465 462 aa19.58■□□□□ 0.72
PDE6D-205ENST00000486044 NCAPG2Q86XI2 1143 aa19.58■□□□□ 0.72
PDE6D-205ENST00000486044 SH2D4AQ9H788 454 aa19.58■□□□□ 0.72
PDE6D-205ENST00000486044 SWAP70Q9UH65 585 aa19.58■□□□□ 0.72
PDE6D-205ENST00000486044 UNC80Q8N2C7 3258 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 COBLO75128 1261 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 FLOT1O75955 427 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 FCER1AP12319 257 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 SNX17Q15036 470 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 ANO1Q5XXA6 986 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 ARHGEF10LQ9HCE6 1279 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 RLFQ13129 1914 aa19.57■□□□□ 0.72
PDE6D-205ENST00000486044 PDE6AP16499 860 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 DSG3P32926 999 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 ADCYAP1R1P41586 468 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 TRIM60Q495X7 471 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 C1orf53Q5VUE5 145 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 BADQ92934 168 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 CDX2Q99626 313 aaPredicted RBP19.56■□□□□ 0.72
PDE6D-205ENST00000486044 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
PDE6D-205ENST00000486044 LAMA2P24043 3122 aaKnown RBP19.56■□□□□ 0.72
PDE6D-205ENST00000486044 LTBP2Q14767 1821 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 SLC25A27O95847 323 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 SMAD3P84022 425 aaKnown RBP19.55■□□□□ 0.72
PDE6D-205ENST00000486044 CEP85Q6P2H3 762 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 NAV1Q8NEY1 1877 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 MAML3Q96JK9 1138 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 SEMA6BQ9H3T3 888 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 DCP1AQ9NPI6 582 aaPredicted RBP19.55■□□□□ 0.72
PDE6D-205ENST00000486044 NRBP1Q9UHY1 535 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 TMX2Q9Y320 296 aa19.55■□□□□ 0.72
PDE6D-205ENST00000486044 ZNF532Q9HCE3 1301 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 LRRC41Q15345 812 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 PRAMEF19Q5SWL8 479 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 SDR42E1Q8WUS8 393 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 FERMT2Q96AC1 680 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 CCDC17Q96LX7 622 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 PDLIM7Q9NR12 457 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 TACC3Q9Y6A5 838 aa19.54■□□□□ 0.72
PDE6D-205ENST00000486044 RARBP10826 455 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 ICA1Q05084 483 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 C9orf50Q5SZB4 431 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 RNF180Q86T96 592 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 AMOTL1Q8IY63 956 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 SPICE1Q8N0Z3 855 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
PDE6D-205ENST00000486044 MAFAQ8NHW3 353 aaPredicted RBP19.53■□□□□ 0.72
PDE6D-205ENST00000486044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDE6D-205ENST00000486044 ATG4CQ96DT6 458 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 VCPKMTQ9H867 229 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 IL1RAPL2Q9NP60 686 aa19.53■□□□□ 0.72
PDE6D-205ENST00000486044 A0A0G2JMZ2 1700 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 GOLIM4O00461 696 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 WDR46O15213 610 aaKnown RBP19.52■□□□□ 0.72
PDE6D-205ENST00000486044 RLBP1P12271 317 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 FAM47AQ5JRC9 791 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 KIAA1755Q5JYT7 1200 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
PDE6D-205ENST00000486044 SLC44A5Q8NCS7 719 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 RHPN1Q8TCX5 695 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 DNAJC2Q99543 621 aaKnown RBP19.52■□□□□ 0.72
PDE6D-205ENST00000486044 XPNPEP3Q9NQH7 507 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 ATP8A2Q9NTI2 1148 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 PHF24Q9UPV7 400 aa19.52■□□□□ 0.72
PDE6D-205ENST00000486044 TRIM43BA6NCK2 446 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 IFIT2P09913 472 aaKnown RBP19.51■□□□□ 0.71
PDE6D-205ENST00000486044 TLE2Q04725 743 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 KCTD2Q14681 263 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 SIAH1Q8IUQ4 282 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 TRIM43Q96BQ3 446 aaPredicted RBP19.51■□□□□ 0.71
PDE6D-205ENST00000486044 DDRGK1Q96HY6 314 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 MMP19Q99542 508 aa19.51■□□□□ 0.71
PDE6D-205ENST00000486044 DIS3Q9Y2L1 958 aaKnown RBP19.51■□□□□ 0.71
PDE6D-205ENST00000486044 TCRBV5S4A2TA0A5A2 114 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms