RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 SLC4A4Q9Y6R1 1079 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 IVNS1ABPQ9Y6Y0 642 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 MYH7P12883 1935 aa20.64■□□□□ 0.89
SMC4-216ENST00000485645 BAZ2AQ9UIF9 1905 aaKnown RBP20.64■□□□□ 0.89
SMC4-216ENST00000485645 MYH8P13535 1937 aa20.63■□□□□ 0.89
SMC4-216ENST00000485645 SLC15A5A6NIM6 579 aa20.63■□□□□ 0.89
SMC4-216ENST00000485645 AKR1B1P15121 316 aa20.63■□□□□ 0.89
SMC4-216ENST00000485645 PTPREP23469 700 aa20.63■□□□□ 0.89
SMC4-216ENST00000485645 CDK8P49336 464 aa20.63■□□□□ 0.89
SMC4-216ENST00000485645 TANGO6Q9C0B7 1094 aa20.63■□□□□ 0.89
SMC4-216ENST00000485645 PUS7LQ9H0K6 701 aaKnown RBP20.63■□□□□ 0.89
SMC4-216ENST00000485645 CYP2D7A0A087X1C5 515 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 ICA1Q05084 483 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 C16orf86Q6ZW13 317 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 LPAR1Q92633 364 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 C11orf49Q9H6J7 331 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 DCTPP1Q9H773 170 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
SMC4-216ENST00000485645 CCND3P30281 292 aaPredicted RBP20.61■□□□□ 0.89
SMC4-216ENST00000485645 MNX1P50219 401 aaPredicted RBP20.61■□□□□ 0.89
SMC4-216ENST00000485645 GRB14Q14449 540 aa20.61■□□□□ 0.89
SMC4-216ENST00000485645 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
SMC4-216ENST00000485645 TMX2Q9Y320 296 aa20.61■□□□□ 0.89
SMC4-216ENST00000485645 SMIM22K7EJ46 135 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 KIAA1755Q5JYT7 1200 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 CTR9Q6PD62 1173 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 CLEC10AQ8IUN9 316 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 SIAH1Q8IUQ4 282 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 PRO3102Q9H379 93 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 VCPKMTQ9H867 229 aa20.6■□□□□ 0.89
SMC4-216ENST00000485645 ALPK3Q96L96 1907 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 HOXC6P09630 235 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 DSG3P32926 999 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 LHX8Q68G74 356 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 C7orf61Q8IZ16 206 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 SPICE1Q8N0Z3 855 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 MB21D1Q8N884 522 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 KBTBD3Q8NAB2 608 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 MOV10L1Q9BXT6 1211 aaKnown RBP20.59■□□□□ 0.89
SMC4-216ENST00000485645 SPATC1LQ9H0A9 340 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 FLRT1Q9NZU1 646 aa20.59■□□□□ 0.89
SMC4-216ENST00000485645 ARPP21Q9UBL0 812 aaPredicted RBP20.59■□□□□ 0.89
SMC4-216ENST00000485645 RANBP2P49792 3224 aaKnown RBP20.59■□□□□ 0.89
SMC4-216ENST00000485645 FLOT1O75955 427 aa20.58■□□□□ 0.89
SMC4-216ENST00000485645 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.89
SMC4-216ENST00000485645 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.89
SMC4-216ENST00000485645 WDR46O15213 610 aaKnown RBP20.57■□□□□ 0.88
SMC4-216ENST00000485645 STRNO43815 780 aa20.57■□□□□ 0.88
SMC4-216ENST00000485645 DPP9Q86TI2 863 aa20.57■□□□□ 0.88
SMC4-216ENST00000485645 SHCBP1Q8NEM2 672 aa20.57■□□□□ 0.88
SMC4-216ENST00000485645 NPLOC4Q8TAT6 608 aa20.57■□□□□ 0.88
SMC4-216ENST00000485645 RLFQ13129 1914 aa20.57■□□□□ 0.88
SMC4-216ENST00000485645 A0A1W2PPC1 479 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 EEF2P13639 858 aaKnown RBP20.56■□□□□ 0.88
SMC4-216ENST00000485645 ERCC3P19447 782 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 ADORA2AP29274 412 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 PLS1Q14651 629 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 APPBP2Q92624 585 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 ATG4CQ96DT6 458 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 STAP2Q9UGK3 403 aa20.56■□□□□ 0.88
SMC4-216ENST00000485645 PFASO15067 1338 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 RNF113AO15541 343 aaKnown RBP20.55■□□□□ 0.88
SMC4-216ENST00000485645 ZFYP08048 801 aaPredicted RBP20.55■□□□□ 0.88
SMC4-216ENST00000485645 CNGA1P29973 690 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 SBK1Q52WX2 424 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 GIMAP6Q6P9H5 292 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 SAMD1Q6SPF0 538 aaPredicted RBP20.55■□□□□ 0.88
SMC4-216ENST00000485645 OSBP2Q969R2 916 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 MROH8Q9H579 483 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 GOPCQ9HD26 462 aa20.55■□□□□ 0.88
SMC4-216ENST00000485645 ZMYND8Q9ULU4 1186 aaPredicted RBP20.55■□□□□ 0.88
SMC4-216ENST00000485645 GSG1L2A8MUP6 293 aa20.54■□□□□ 0.88
SMC4-216ENST00000485645 MSCO60682 206 aa20.54■□□□□ 0.88
SMC4-216ENST00000485645 COL6A1P12109 1028 aa20.54■□□□□ 0.88
SMC4-216ENST00000485645 CYP2C19P33261 490 aa20.54■□□□□ 0.88
SMC4-216ENST00000485645 NCAPG2Q86XI2 1143 aa20.54■□□□□ 0.88
SMC4-216ENST00000485645 SLC5A4Q9NY91 659 aa20.54■□□□□ 0.88
SMC4-216ENST00000485645 DDX20Q9UHI6 824 aaKnown RBP20.54■□□□□ 0.88
SMC4-216ENST00000485645 A0A0G2JMZ2 1700 aa20.53■□□□□ 0.88
SMC4-216ENST00000485645 LRRFIP1Q32MZ4 808 aaKnown RBP20.53■□□□□ 0.88
SMC4-216ENST00000485645 OLFML2BQ68BL8 750 aa20.53■□□□□ 0.88
SMC4-216ENST00000485645 MKNK2Q9HBH9 465 aa20.53■□□□□ 0.88
SMC4-216ENST00000485645 SZT2Q5T011 3432 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 MINDY4BA8MYZ0 360 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 GPAA1O43292 621 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 RAD21O60216 631 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 GNAT2P19087 354 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 ABRAQ8N0Z2 381 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 STK11IPQ8N1F8 1099 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 GDF15Q99988 308 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.88
SMC4-216ENST00000485645 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.87
SMC4-216ENST00000485645 ZNF236Q9UL36 1845 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 ERC2O15083 957 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 COBLO75128 1261 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 SLC25A27O95847 323 aa20.51■□□□□ 0.87
SMC4-216ENST00000485645 IGHA2P01877 340 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms