RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 CCL14Q16627 93 aa30.91■■■□□ 2.54
HLA-F-227ENST00000485513 CCDC17Q96LX7 622 aa30.91■■■□□ 2.54
HLA-F-227ENST00000485513 TANGO6Q9C0B7 1094 aa30.91■■■□□ 2.54
HLA-F-227ENST00000485513 ARHGEF10LQ9HCE6 1279 aa30.91■■■□□ 2.54
HLA-F-227ENST00000485513 SMIM22K7EJ46 135 aa30.9■■■□□ 2.54
HLA-F-227ENST00000485513 ICA1Q05084 483 aa30.9■■■□□ 2.54
HLA-F-227ENST00000485513 CACNB2Q08289 660 aaPredicted RBP30.9■■■□□ 2.54
HLA-F-227ENST00000485513 COG2Q14746 738 aa30.9■■■□□ 2.54
HLA-F-227ENST00000485513 HOXC10Q9NYD6 342 aa30.9■■■□□ 2.54
HLA-F-227ENST00000485513 SLC15A5A6NIM6 579 aa30.89■■■□□ 2.54
HLA-F-227ENST00000485513 C16orf86Q6ZW13 317 aa30.89■■■□□ 2.54
HLA-F-227ENST00000485513 CLEC10AQ8IUN9 316 aa30.89■■■□□ 2.54
HLA-F-227ENST00000485513 SH2D4AQ9H788 454 aa30.89■■■□□ 2.54
HLA-F-227ENST00000485513 OGDHLQ9ULD0 1010 aa30.89■■■□□ 2.54
HLA-F-227ENST00000485513 IVNS1ABPQ9Y6Y0 642 aa30.89■■■□□ 2.54
HLA-F-227ENST00000485513 PTPREP23469 700 aa30.88■■■□□ 2.53
HLA-F-227ENST00000485513 SIAH1Q8IUQ4 282 aa30.88■■■□□ 2.53
HLA-F-227ENST00000485513 KBTBD3Q8NAB2 608 aa30.88■■■□□ 2.53
HLA-F-227ENST00000485513 LPAR1Q92633 364 aa30.88■■■□□ 2.53
HLA-F-227ENST00000485513 NBPF3Q9H094 633 aa30.88■■■□□ 2.53
HLA-F-227ENST00000485513 TMX2Q9Y320 296 aa30.88■■■□□ 2.53
HLA-F-227ENST00000485513 ALPK3Q96L96 1907 aa30.87■■■□□ 2.53
HLA-F-227ENST00000485513 KIAA1755Q5JYT7 1200 aa30.87■■■□□ 2.53
HLA-F-227ENST00000485513 CTR9Q6PD62 1173 aa30.87■■■□□ 2.53
HLA-F-227ENST00000485513 TSHZ3Q63HK5 1081 aa30.86■■■□□ 2.53
HLA-F-227ENST00000485513 STRBPQ96SI9 672 aaKnown RBP30.86■■■□□ 2.53
HLA-F-227ENST00000485513 RBM27Q9P2N5 1060 aaKnown RBP30.86■■■□□ 2.53
HLA-F-227ENST00000485513 RLFQ13129 1914 aa30.86■■■□□ 2.53
HLA-F-227ENST00000485513 MNX1P50219 401 aaPredicted RBP30.85■■■□□ 2.53
HLA-F-227ENST00000485513 GRB14Q14449 540 aa30.85■■■□□ 2.53
HLA-F-227ENST00000485513 SPICE1Q8N0Z3 855 aa30.85■■■□□ 2.53
HLA-F-227ENST00000485513 VCPKMTQ9H867 229 aa30.85■■■□□ 2.53
HLA-F-227ENST00000485513 ARPP21Q9UBL0 812 aaPredicted RBP30.85■■■□□ 2.53
HLA-F-227ENST00000485513 CCND3P30281 292 aaPredicted RBP30.84■■■□□ 2.53
HLA-F-227ENST00000485513 MFSD14CQ5VZR4 134 aa30.84■■■□□ 2.53
HLA-F-227ENST00000485513 MOV10L1Q9BXT6 1211 aaKnown RBP30.84■■■□□ 2.53
HLA-F-227ENST00000485513 HOXC6P09630 235 aa30.83■■■□□ 2.53
HLA-F-227ENST00000485513 MB21D1Q8N884 522 aa30.83■■■□□ 2.53
HLA-F-227ENST00000485513 APPBP2Q92624 585 aa30.83■■■□□ 2.53
HLA-F-227ENST00000485513 SPATC1LQ9H0A9 340 aa30.83■■■□□ 2.53
HLA-F-227ENST00000485513 C11orf49Q9H6J7 331 aa30.83■■■□□ 2.53
HLA-F-227ENST00000485513 A0A0G2JMZ2 1700 aa30.83■■■□□ 2.53
HLA-F-227ENST00000485513 FLOT1O75955 427 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 DSG3P32926 999 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 ATP2B2Q01814 1243 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 OSBP2Q969R2 916 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 KANSL2Q9H9L4 492 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 FLRT1Q9NZU1 646 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 PCDHB15Q9Y5E8 787 aa30.82■■■□□ 2.52
HLA-F-227ENST00000485513 WDR46O15213 610 aaKnown RBP30.81■■■□□ 2.52
HLA-F-227ENST00000485513 RNF113AO15541 343 aaKnown RBP30.81■■■□□ 2.52
HLA-F-227ENST00000485513 ZFYP08048 801 aaPredicted RBP30.81■■■□□ 2.52
HLA-F-227ENST00000485513 EEF2P13639 858 aaKnown RBP30.81■■■□□ 2.52
HLA-F-227ENST00000485513 SBK1Q52WX2 424 aa30.81■■■□□ 2.52
HLA-F-227ENST00000485513 PRO3102Q9H379 93 aa30.81■■■□□ 2.52
HLA-F-227ENST00000485513 RANBP2P49792 3224 aaKnown RBP30.8■■■□□ 2.52
HLA-F-227ENST00000485513 GSG1L2A8MUP6 293 aa30.8■■■□□ 2.52
HLA-F-227ENST00000485513 LHX8Q68G74 356 aa30.8■■■□□ 2.52
HLA-F-227ENST00000485513 GIMAP6Q6P9H5 292 aa30.8■■■□□ 2.52
HLA-F-227ENST00000485513 SHCBP1Q8NEM2 672 aa30.8■■■□□ 2.52
HLA-F-227ENST00000485513 NPLOC4Q8TAT6 608 aa30.8■■■□□ 2.52
HLA-F-227ENST00000485513 ATG4CQ96DT6 458 aa30.8■■■□□ 2.52
HLA-F-227ENST00000485513 STRNO43815 780 aa30.79■■■□□ 2.52
HLA-F-227ENST00000485513 C7orf61Q8IZ16 206 aa30.79■■■□□ 2.52
HLA-F-227ENST00000485513 TTC41PQ6P2S7 1318 aa30.78■■■□□ 2.52
HLA-F-227ENST00000485513 PARP14Q460N5 1801 aa30.78■■■□□ 2.52
HLA-F-227ENST00000485513 ZNF236Q9UL36 1845 aa30.78■■■□□ 2.52
HLA-F-227ENST00000485513 ERCC3P19447 782 aa30.78■■■□□ 2.52
HLA-F-227ENST00000485513 PLS1Q14651 629 aa30.78■■■□□ 2.52
HLA-F-227ENST00000485513 SAMD1Q6SPF0 538 aaPredicted RBP30.78■■■□□ 2.52
HLA-F-227ENST00000485513 DPP9Q86TI2 863 aa30.78■■■□□ 2.52
HLA-F-227ENST00000485513 GPAA1O43292 621 aa30.77■■■□□ 2.52
HLA-F-227ENST00000485513 ADORA2AP29274 412 aa30.77■■■□□ 2.52
HLA-F-227ENST00000485513 LRRFIP1Q32MZ4 808 aaKnown RBP30.77■■■□□ 2.52
HLA-F-227ENST00000485513 GOPCQ9HD26 462 aa30.77■■■□□ 2.52
HLA-F-227ENST00000485513 MINDY4BA8MYZ0 360 aa30.76■■■□□ 2.51
HLA-F-227ENST00000485513 ERC2O15083 957 aa30.76■■■□□ 2.51
HLA-F-227ENST00000485513 GNAT2P19087 354 aa30.76■■■□□ 2.51
HLA-F-227ENST00000485513 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.76■■■□□ 2.51
HLA-F-227ENST00000485513 MROH8Q9H579 483 aa30.76■■■□□ 2.51
HLA-F-227ENST00000485513 MKNK2Q9HBH9 465 aa30.76■■■□□ 2.51
HLA-F-227ENST00000485513 PFASO15067 1338 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 FRMPD3Q5JV73 1810 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 GREB1LQ9C091 1923 aaPredicted RBP30.75■■■□□ 2.51
HLA-F-227ENST00000485513 RASA1P20936 1047 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 CYP2C19P33261 490 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 RRP1P56182 461 aaKnown RBP30.75■■■□□ 2.51
HLA-F-227ENST00000485513 NCAPG2Q86XI2 1143 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 STK11IPQ8N1F8 1099 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 ROBO3Q96MS0 1386 aa30.75■■■□□ 2.51
HLA-F-227ENST00000485513 M0R2C6 588 aa30.74■■■□□ 2.51
HLA-F-227ENST00000485513 RAD21O60216 631 aa30.74■■■□□ 2.51
HLA-F-227ENST00000485513 CNGA1P29973 690 aa30.74■■■□□ 2.51
HLA-F-227ENST00000485513 TDO2P48775 406 aa30.74■■■□□ 2.51
HLA-F-227ENST00000485513 EPB41L4AQ9HCS5 686 aaPredicted RBP30.74■■■□□ 2.51
HLA-F-227ENST00000485513 STAP2Q9UGK3 403 aa30.74■■■□□ 2.51
HLA-F-227ENST00000485513 APPP05067 770 aa30.73■■■□□ 2.51
HLA-F-227ENST00000485513 COL6A1P12109 1028 aa30.73■■■□□ 2.51
HLA-F-227ENST00000485513 OLFML2BQ68BL8 750 aa30.73■■■□□ 2.51
HLA-F-227ENST00000485513 PI4K2BQ8TCG2 481 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms