RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ARRDC4Q8NCT1 418 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 TRPV1Q8NER1 839 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 RHPN1Q8TCX5 695 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 MOV10L1Q9BXT6 1211 aaKnown RBP15.78■□□□□ 0.12
HDAC6-227ENST00000485102 SPATC1LQ9H0A9 340 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 MCM9Q9NXL9 1143 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 SWAP70Q9UH65 585 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 EXOC6BQ9Y2D4 811 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 TCRBV5S4A2TA0A5A2 114 aa15.77■□□□□ 0.12
HDAC6-227ENST00000485102 MDM2Q00987 491 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-227ENST00000485102 TMEM179Q6ZVK1 233 aa15.77■□□□□ 0.12
HDAC6-227ENST00000485102 DPP9Q86TI2 863 aa15.77■□□□□ 0.12
HDAC6-227ENST00000485102 MROH8Q9H579 483 aa15.77■□□□□ 0.12
HDAC6-227ENST00000485102 DCP1AQ9NPI6 582 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-227ENST00000485102 LAMA2P24043 3122 aaKnown RBP15.77■□□□□ 0.11
HDAC6-227ENST00000485102 SEPT4O43236 478 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 ADORA2AP29274 412 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 CNGA1P29973 690 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 DSG3P32926 999 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 SIAH1Q8IUQ4 282 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 CLASRPQ8N2M8 674 aaKnown RBP15.76■□□□□ 0.11
HDAC6-227ENST00000485102 LBHD1Q9BQE6 289 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-227ENST00000485102 SLC5A4Q9NY91 659 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 TMX2Q9Y320 296 aa15.76■□□□□ 0.11
HDAC6-227ENST00000485102 ZNF532Q9HCE3 1301 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 ERCC3P19447 782 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 SNX17Q15036 470 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 C1orf53Q5VUE5 145 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 RPAP2Q8IXW5 612 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-227ENST00000485102 KIF1BPQ96EK5 621 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 CCDC17Q96LX7 622 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 ATP8A2Q9NTI2 1148 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 NRBP1Q9UHY1 535 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
HDAC6-227ENST00000485102 SMCHD1A6NHR9 2005 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 COBLO75128 1261 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 RTP1P59025 263 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 KIAA1755Q5JYT7 1200 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 SH2D4AQ9H788 454 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 IL1RAPL2Q9NP60 686 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 PRKAG2Q9UGJ0 569 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 ADAMTS5Q9UNA0 930 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 UNC80Q8N2C7 3258 aa15.74■□□□□ 0.11
HDAC6-227ENST00000485102 ZNFX1Q9P2E3 1918 aaKnown RBP15.74■□□□□ 0.11
HDAC6-227ENST00000485102 MPHOSPH10O00566 681 aaKnown RBP15.73■□□□□ 0.11
HDAC6-227ENST00000485102 MS4A1P11836 297 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 ATN1P54259 1190 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-227ENST00000485102 EVX2Q03828 476 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 SLC39A5Q6ZMH5 540 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 LCORLQ8N3X6 602 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 SDR42E1Q8WUS8 393 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 TANGO6Q9C0B7 1094 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 VCPKMTQ9H867 229 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 ARHGEF10LQ9HCE6 1279 aa15.73■□□□□ 0.11
HDAC6-227ENST00000485102 KBTBD13C9JR72 458 aa15.72■□□□□ 0.11
HDAC6-227ENST00000485102 GOLIM4O00461 696 aa15.72■□□□□ 0.11
HDAC6-227ENST00000485102 WDR46O15213 610 aaKnown RBP15.72■□□□□ 0.11
HDAC6-227ENST00000485102 RAB11FIP3O75154 756 aa15.72■□□□□ 0.11
HDAC6-227ENST00000485102 SLC25A27O95847 323 aa15.72■□□□□ 0.11
HDAC6-227ENST00000485102 GJC2Q5T442 439 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-227ENST00000485102 C12orf60Q5U649 245 aa15.72■□□□□ 0.11
HDAC6-227ENST00000485102 MAML3Q96JK9 1138 aa15.72■□□□□ 0.11
HDAC6-227ENST00000485102 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
HDAC6-227ENST00000485102 HMMRO75330 724 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 FLOT1O75955 427 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 IFIT2P09913 472 aaKnown RBP15.71■□□□□ 0.11
HDAC6-227ENST00000485102 FCER1AP12319 257 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 ADD2P35612 726 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
HDAC6-227ENST00000485102 ICA1Q05084 483 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 ATG4CQ96DT6 458 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 GUCD1Q96NT3 240 aa15.71■□□□□ 0.11
HDAC6-227ENST00000485102 LTBP2Q14767 1821 aa15.71■□□□□ 0.1
HDAC6-227ENST00000485102 PARP14Q460N5 1801 aa15.71■□□□□ 0.1
HDAC6-227ENST00000485102 MYH8P13535 1937 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 CYP2D6P10635 497 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 AKR1B1P15121 316 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 ATP5JP18859 108 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 CDK8P49336 464 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 TMEM132BQ14DG7 1078 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 LRRC41Q15345 812 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 UBE3CQ15386 1083 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 C16orf86Q6ZW13 317 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 NCAPG2Q86XI2 1143 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 RIOX2Q8IUF8 465 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 SIRT2Q8IXJ6 389 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 DYNLL2Q96FJ2 89 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
HDAC6-227ENST00000485102 ARMT1Q9H993 441 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 KANSL2Q9H9L4 492 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 ZBTB40Q9NUA8 1239 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 PAG1Q9NWQ8 432 aa15.7■□□□□ 0.1
HDAC6-227ENST00000485102 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.69■□□□□ 0.13e-8■■■■□ 19.7
HDAC6-227ENST00000485102 PHF24Q9UPV7 400 aa15.69■□□□□ 0.1
HDAC6-227ENST00000485102 ATP11BQ9Y2G3 1177 aa15.69■□□□□ 0.1
HDAC6-227ENST00000485102 ROBO3Q96MS0 1386 aa15.69■□□□□ 0.1
HDAC6-227ENST00000485102 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms