RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 IRX3P78415 501 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-213ENST00000485080 LACTBP83111 547 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-213ENST00000485080 IMMTQ16891 758 aaKnown RBP21.06■□□□□ 0.96
SREBF1-213ENST00000485080 FAM110CQ1W6H9 321 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 LBX2Q6XYB7 198 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 MFSD6Q6ZSS7 791 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 P2RX7Q99572 595 aaKnown RBP21.06■□□□□ 0.96
SREBF1-213ENST00000485080 ESYT1Q9BSJ8 1104 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 INCENPQ9NQS7 918 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 TCP11L1Q9NUJ3 509 aa21.06■□□□□ 0.96
SREBF1-213ENST00000485080 GNRH1P01148 92 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 HERVK_113P62684 666 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 ZYXQ15942 572 aaKnown RBP21.05■□□□□ 0.96
SREBF1-213ENST00000485080 FAM47AQ5JRC9 791 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 MAP4K1Q92918 833 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 GOPCQ9HD26 462 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 MORF4L1Q9UBU8 362 aa21.05■□□□□ 0.96
SREBF1-213ENST00000485080 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-213ENST00000485080 TSPY2A6NKD2 308 aa21.04■□□□□ 0.96
SREBF1-213ENST00000485080 WDR46O15213 610 aaKnown RBP21.04■□□□□ 0.96
SREBF1-213ENST00000485080 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
SREBF1-213ENST00000485080 PTH1RQ03431 593 aa21.04■□□□□ 0.96
SREBF1-213ENST00000485080 KIAA1755Q5JYT7 1200 aa21.04■□□□□ 0.96
SREBF1-213ENST00000485080 CD99L2Q8TCZ2 262 aa21.04■□□□□ 0.96
SREBF1-213ENST00000485080 RPAP3Q9H6T3 665 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-213ENST00000485080 IL17RBQ9NRM6 502 aa21.04■□□□□ 0.96
SREBF1-213ENST00000485080 CDC45O75419 566 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 ATP2B2Q01814 1243 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 KIF22Q14807 665 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 OTOP1Q7RTM1 612 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 TNS4Q8IZW8 715 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 GMCL1P1Q8NEA9 526 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 HOXC10Q9NYD6 342 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 CLIP2Q9UDT6 1046 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 MYPNQ86TC9 1320 aa21.03■□□□□ 0.96
SREBF1-213ENST00000485080 CAP1Q01518 475 aa21.02■□□□□ 0.96
SREBF1-213ENST00000485080 CASC1Q6TDU7 716 aa21.02■□□□□ 0.96
SREBF1-213ENST00000485080 MCOLN1Q9GZU1 580 aa21.02■□□□□ 0.96
SREBF1-213ENST00000485080 LSG1Q9H089 658 aaKnown RBP21.02■□□□□ 0.96
SREBF1-213ENST00000485080 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
SREBF1-213ENST00000485080 F5H6K3 240 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 KLRC3Q07444 240 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 COG2Q14746 738 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 POTEEQ6S8J3 1075 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 KIAA1211Q6ZU35 1233 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 ESR2Q92731 530 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 TTC14Q96N46 770 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 CNNM2Q9H8M5 875 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 RBPJLQ9UBG7 517 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 RABGAP1Q9Y3P9 1069 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 MYH4Q9Y623 1939 aa21.01■□□□□ 0.95
SREBF1-213ENST00000485080 RLFQ13129 1914 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 CYP21A2P08686 494 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 PRMT2P55345 433 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 FBXO46Q6PJ61 603 aaPredicted RBP21■□□□□ 0.95
SREBF1-213ENST00000485080 ANKRD13CQ8N6S4 541 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 KRT23Q9C075 422 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 TOMM22Q9NS69 142 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 TRIM17Q9Y577 477 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 NEDD4P46934 1319 aa21■□□□□ 0.95
SREBF1-213ENST00000485080 SPDYE16A6NNV3 312 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-213ENST00000485080 NDUFB10O96000 172 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 CTGFP29279 349 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 PSMC4P43686 418 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 CCDC178Q5BJE1 867 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 RRP12Q5JTH9 1297 aaKnown RBP20.99■□□□□ 0.95
SREBF1-213ENST00000485080 SPICE1Q8N0Z3 855 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 GPRC5AQ8NFJ5 357 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 TRIM47Q96LD4 638 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 ADAMTS5Q9UNA0 930 aa20.99■□□□□ 0.95
SREBF1-213ENST00000485080 CENPFP49454 3210 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 DSG3P32926 999 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 FCGRTP55899 365 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 MB21D1Q8N884 522 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 ANKS1AQ92625 1134 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 GMCL1Q96IK5 515 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 TANGO6Q9C0B7 1094 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 ARHGAP39Q9C0H5 1083 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 TXNRD2Q9NNW7 524 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 STX8Q9UNK0 236 aa20.98■□□□□ 0.95
SREBF1-213ENST00000485080 RBM8AQ9Y5S9 174 aaKnown RBP20.98■□□□□ 0.95
SREBF1-213ENST00000485080 NMT2O60551 498 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 HOXD10P28358 340 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 ERVK-9P63128 1117 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 ERVK-24P63145 666 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 RCSD1Q6JBY9 416 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 DGKHQ86XP1 1220 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 NKX2-3Q8TAU0 364 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 PTPN22Q9Y2R2 807 aa20.97■□□□□ 0.95
SREBF1-213ENST00000485080 CNMDO75829 334 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 FLOT1O75955 427 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 TOP1P11387 765 aaKnown RBP20.96■□□□□ 0.95
SREBF1-213ENST00000485080 NECTIN1Q15223 517 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 IQCA1Q86XH1 822 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 LRRC47Q8N1G4 583 aaKnown RBP20.96■□□□□ 0.95
SREBF1-213ENST00000485080 ZSWIM5Q9P217 1185 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 SRRDQ9UH36 339 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 MGAMO43451 1857 aa20.96■□□□□ 0.95
SREBF1-213ENST00000485080 DOCK3Q8IZD9 2030 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms