RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 MOGSQ13724 837 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 ALX1Q15699 326 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
MACF1-220ENST00000485063 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
MACF1-220ENST00000485063 GPAT2Q6NUI2 795 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
MACF1-220ENST00000485063 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 KANSL2Q9H9L4 492 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 ZMYM6O95789 1325 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 RAD50Q92878 1312 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 ZNF213O14771 459 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 FGAP02671 866 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 TSPY3P0CV98 308 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 TSPY8P0CW00 308 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 CYP2C8P10632 490 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 AKR1B1P15121 316 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 GCLCP48506 637 aaPredicted RBP9.28□□□□□ -0.92
MACF1-220ENST00000485063 ATP2B2Q01814 1243 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 PDAP1Q13442 181 aaKnown RBP9.28□□□□□ -0.92
MACF1-220ENST00000485063 SHROOM1Q2M3G4 852 aaPredicted RBP9.28□□□□□ -0.92
MACF1-220ENST00000485063 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 TREML2Q5T2D2 321 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 ZNF589Q86UQ0 364 aaPredicted RBP9.28□□□□□ -0.92
MACF1-220ENST00000485063 R3HDMLQ9H3Y0 253 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 GOPCQ9HD26 462 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 TOMM22Q9NS69 142 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 PPP4R2Q9NY27 417 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 CTNNA3Q9UI47 895 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 MYH4Q9Y623 1939 aa9.28□□□□□ -0.92
MACF1-220ENST00000485063 TSPY2A6NKD2 308 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L15C9J2P7 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L13C9JLJ4 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L11C9JVI0 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L18D6R9N7 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L22D6RA61 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L17D6RBQ6 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L19D6RCP7 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L20D6RJB6 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 RAD21O60216 631 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 GNRH1P01148 92 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.93
MACF1-220ENST00000485063 RASA1P20936 1047 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 HOXD10P28358 340 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
MACF1-220ENST00000485063 GUCY1A2P33402 732 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 USP17L24Q0WX57 530 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 IMMTQ16891 758 aaKnown RBP9.27□□□□□ -0.93
MACF1-220ENST00000485063 CASC1Q6TDU7 716 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 CD99L2Q8TCZ2 262 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 GTF3C2Q8WUA4 911 aaPredicted RBP9.27□□□□□ -0.93
MACF1-220ENST00000485063 SPOCK2Q92563 424 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 LPAR1Q92633 364 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 C12orf42Q96LP6 360 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 DSCC1Q9BVC3 393 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 ASCC2Q9H1I8 757 aaPredicted RBP9.27□□□□□ -0.93
MACF1-220ENST00000485063 RNF41Q9H4P4 317 aaPredicted RBP9.27□□□□□ -0.93
MACF1-220ENST00000485063 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 TRIM17Q9Y577 477 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 MGAMO43451 1857 aa9.27□□□□□ -0.93
MACF1-220ENST00000485063 LAMA4Q16363 1823 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 SMIM22K7EJ46 135 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 RANBP6O60518 1105 aaKnown RBP9.26□□□□□ -0.93
MACF1-220ENST00000485063 PRDM1O75626 825 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 EEF2P13639 858 aaKnown RBP9.26□□□□□ -0.93
MACF1-220ENST00000485063 CHMLP26374 656 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
MACF1-220ENST00000485063 TFAP4Q01664 338 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 BMP2KLQ5H9B9 411 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 RRP12Q5JTH9 1297 aaKnown RBP9.26□□□□□ -0.93
MACF1-220ENST00000485063 C17orf99Q6UX52 265 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 MFSD6Q6ZSS7 791 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 KIAA1211Q6ZU35 1233 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 CCAR1Q8IX12 1150 aaKnown RBP9.26□□□□□ -0.93
MACF1-220ENST00000485063 ACER1Q8TDN7 264 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 MCOLN1Q9GZU1 580 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 TMX2Q9Y320 296 aa9.26□□□□□ -0.93
MACF1-220ENST00000485063 GREB1LQ9C091 1923 aaPredicted RBP9.26□□□□□ -0.93
MACF1-220ENST00000485063 A0A1W2PRG0 241 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 FOXP2O15409 715 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 FMNL1O95466 1100 aaPredicted RBP9.25□□□□□ -0.93
MACF1-220ENST00000485063 TTLL1O95922 423 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 VCAM1P19320 739 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 NT5C2P49902 561 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 FCGRTP55899 365 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 HAND2P61296 217 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 FAM110CQ1W6H9 321 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 FAM47AQ5JRC9 791 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 AKNAD1Q5T1N1 836 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 FBXO46Q6PJ61 603 aaPredicted RBP9.25□□□□□ -0.93
MACF1-220ENST00000485063 CATSPERGQ6ZRH7 1159 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 OTOP1Q7RTM1 612 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 ANKRD13CQ8N6S4 541 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
MACF1-220ENST00000485063 RPAP3Q9H6T3 665 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms