RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ANAPC4Q9UJX5 808 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 ZMYM6O95789 1325 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 MGAMO43451 1857 aa22.71■■□□□ 1.23
SNX17-206ENST00000484886 GREB1LQ9C091 1923 aaPredicted RBP22.7■■□□□ 1.23
SNX17-206ENST00000484886 TNPO2O14787 897 aaKnown RBP22.7■■□□□ 1.22
SNX17-206ENST00000484886 RANBP6O60518 1105 aaKnown RBP22.7■■□□□ 1.22
SNX17-206ENST00000484886 TFAP4Q01664 338 aa22.7■■□□□ 1.22
SNX17-206ENST00000484886 SKAP1Q86WV1 359 aa22.7■■□□□ 1.22
SNX17-206ENST00000484886 GTF3C2Q8WUA4 911 aaPredicted RBP22.7■■□□□ 1.22
SNX17-206ENST00000484886 INCENPQ9NQS7 918 aa22.7■■□□□ 1.22
SNX17-206ENST00000484886 TSPY2A6NKD2 308 aa22.69■■□□□ 1.22
SNX17-206ENST00000484886 RRP12Q5JTH9 1297 aaKnown RBP22.69■■□□□ 1.22
SNX17-206ENST00000484886 KIAA1755Q5JYT7 1200 aa22.69■■□□□ 1.22
SNX17-206ENST00000484886 SAMD1Q6SPF0 538 aaPredicted RBP22.69■■□□□ 1.22
SNX17-206ENST00000484886 CEP95Q96GE4 821 aa22.69■■□□□ 1.22
SNX17-206ENST00000484886 NYAP2Q9P242 653 aa22.69■■□□□ 1.22
SNX17-206ENST00000484886 CLIP2Q9UDT6 1046 aa22.69■■□□□ 1.22
SNX17-206ENST00000484886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.69■■□□□ 1.22
SNX17-206ENST00000484886 PTCH2Q9Y6C5 1203 aa22.69■■□□□ 1.22
SNX17-206ENST00000484886 MYPNQ86TC9 1320 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 RAD50Q92878 1312 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 PEX10O60683 326 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 CHMLP26374 656 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 CCAR1Q8IX12 1150 aaKnown RBP22.68■■□□□ 1.22
SNX17-206ENST00000484886 GPRC5AQ8NFJ5 357 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 NEDD1Q8NHV4 660 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 SRRDQ9UH36 339 aa22.68■■□□□ 1.22
SNX17-206ENST00000484886 PLIN4Q96Q06 1357 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 MYH4Q9Y623 1939 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 WDR46O15213 610 aaKnown RBP22.67■■□□□ 1.22
SNX17-206ENST00000484886 PRMT2P55345 433 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 RAET1EQ8TD07 263 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 COA7Q96BR5 231 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 DSCC1Q9BVC3 393 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 CWC22Q9HCG8 908 aaKnown RBP22.67■■□□□ 1.22
SNX17-206ENST00000484886 TXNRD2Q9NNW7 524 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 MTMR4Q9NYA4 1195 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 MORF4L1Q9UBU8 362 aa22.67■■□□□ 1.22
SNX17-206ENST00000484886 IGKV6D-41A0A0C4DH26 115 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 ZNF213O14771 459 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 ORC4O43929 436 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 FLOT1O75955 427 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 TTLL1O95922 423 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 SLC9C1Q4G0N8 1177 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 MFSD6Q6ZSS7 791 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 RBPJLQ9UBG7 517 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 CTNNA3Q9UI47 895 aa22.66■■□□□ 1.22
SNX17-206ENST00000484886 SPDYE16A6NNV3 312 aaPredicted RBP22.65■■□□□ 1.22
SNX17-206ENST00000484886 ERVK-9P63128 1117 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 ERVK-24P63145 666 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 PRKCZQ05513 592 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 COG2Q14746 738 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 PPP4R3BQ5MIZ7 849 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 AKNAD1Q5T1N1 836 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 LRRC47Q8N1G4 583 aaKnown RBP22.65■■□□□ 1.22
SNX17-206ENST00000484886 IL25Q9H293 177 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 RNF41Q9H4P4 317 aaPredicted RBP22.65■■□□□ 1.22
SNX17-206ENST00000484886 HOXC10Q9NYD6 342 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 ISY1Q9ULR0 285 aaKnown RBP22.65■■□□□ 1.22
SNX17-206ENST00000484886 RABGAP1Q9Y3P9 1069 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 TACC3Q9Y6A5 838 aa22.65■■□□□ 1.22
SNX17-206ENST00000484886 IMMTQ16891 758 aaKnown RBP22.64■■□□□ 1.21
SNX17-206ENST00000484886 FAM83BQ5T0W9 1011 aa22.64■■□□□ 1.21
SNX17-206ENST00000484886 TBC1D10CQ8IV04 446 aa22.64■■□□□ 1.21
SNX17-206ENST00000484886 STX8Q9UNK0 236 aa22.64■■□□□ 1.21
SNX17-206ENST00000484886 LAMA4Q16363 1823 aa22.64■■□□□ 1.21
SNX17-206ENST00000484886 CCNA1P78396 465 aa22.63■■□□□ 1.21
SNX17-206ENST00000484886 WDR78Q5VTH9 848 aa22.63■■□□□ 1.21
SNX17-206ENST00000484886 NBPF11Q86T75 865 aa22.63■■□□□ 1.21
SNX17-206ENST00000484886 STAG1Q8WVM7 1258 aa22.63■■□□□ 1.21
SNX17-206ENST00000484886 NBPF3Q9H094 633 aa22.63■■□□□ 1.21
SNX17-206ENST00000484886 GABRQQ9UN88 632 aa22.63■■□□□ 1.21
SNX17-206ENST00000484886 F5H6K3 240 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 NMT2O60551 498 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 NDUFB10O96000 172 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 FGRP09769 529 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 PCP11498 1178 aaKnown RBP22.62■■□□□ 1.21
SNX17-206ENST00000484886 FLT3LGP49771 235 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 SOX10P56693 466 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 KLRC3Q07444 240 aa22.62■■□□□ 1.21
SNX17-206ENST00000484886 NUP88Q99567 741 aaPredicted RBP22.62■■□□□ 1.21
SNX17-206ENST00000484886 CNMDO75829 334 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 MYCP01106 439 aaPredicted RBP22.61■■□□□ 1.21
SNX17-206ENST00000484886 MAPK4P31152 587 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 DSG3P32926 999 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 PLS1Q14651 629 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 Q3C1V9 767 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 BMP2KLQ5H9B9 411 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 POTEEQ6S8J3 1075 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 LBX2Q6XYB7 198 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 SH3TC2Q8TF17 1288 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 MKL1Q969V6 931 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 ATG4CQ96DT6 458 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 BTBD7Q9P203 1132 aa22.61■■□□□ 1.21
SNX17-206ENST00000484886 BIN2Q9UBW5 565 aaPredicted RBP22.61■■□□□ 1.21
SNX17-206ENST00000484886 NEDD4P46934 1319 aa22.6■■□□□ 1.21
SNX17-206ENST00000484886 SGSM2O43147 1006 aa22.6■■□□□ 1.21
SNX17-206ENST00000484886 MB21D1Q8N884 522 aa22.6■■□□□ 1.21
SNX17-206ENST00000484886 ESR2Q92731 530 aa22.6■■□□□ 1.21
SNX17-206ENST00000484886 CHMP4CQ96CF2 233 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms