RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 ARSHQ5FYA8 562 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 SPPL2CQ8IUH8 684 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 PPP1R13LQ8WUF5 828 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 PPP1R16BQ96T49 567 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMC4-215ENST00000484799 ADAMTS10Q9H324 1103 aa7.18□□□□□ -1.26
SMC4-215ENST00000484799 DNAJC25-GNG10A0A024R161 153 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 WASH4PA8MWX3 477 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 ESR1P03372 595 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 RAD51AP2Q09MP3 1159 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 GK5Q6ZS86 529 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 ERMP1Q7Z2K6 904 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 NKD1Q969G9 470 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 DIRC2Q96SL1 478 aa7.17□□□□□ -1.26
SMC4-215ENST00000484799 ZNF503-AS2A6NEH8 195 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 SLC22A31A6NKX4 558 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 RGS13O14921 159 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 RAP1GAPP47736 663 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 DUSP4Q13115 394 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 LRRFIP1Q32MZ4 808 aaKnown RBP7.16□□□□□ -1.26
SMC4-215ENST00000484799 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 GMIPQ9P107 970 aa7.16□□□□□ -1.26
SMC4-215ENST00000484799 DBX1A6NMT0 343 aa7.15□□□□□ -1.26
SMC4-215ENST00000484799 NFIBO00712 420 aa7.15□□□□□ -1.26
SMC4-215ENST00000484799 TMEM253P0C7T8 217 aa7.15□□□□□ -1.26
SMC4-215ENST00000484799 PRR23BQ6ZRT6 265 aa7.15□□□□□ -1.26
SMC4-215ENST00000484799 SYDE1Q6ZW31 735 aaPredicted RBP7.15□□□□□ -1.26
SMC4-215ENST00000484799 ENOX1Q8TC92 643 aaKnown RBP7.15□□□□□ -1.26
SMC4-215ENST00000484799 NSUN3Q9H649 340 aaKnown RBP7.15□□□□□ -1.26
SMC4-215ENST00000484799 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
SMC4-215ENST00000484799 ZMYM5Q9UJ78 669 aa7.15□□□□□ -1.26
SMC4-215ENST00000484799 GREM1O60565 184 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 GARTP22102 1010 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 ANKLE2Q86XL3 938 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 FBXO15Q8NCQ5 510 aaPredicted RBP7.14□□□□□ -1.27
SMC4-215ENST00000484799 PDZD8Q8NEN9 1154 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 SPON2Q9BUD6 331 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 EPB41L4BQ9H329 900 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 UBP1Q9NZI7 540 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 PCDHA11Q9Y5I1 949 aa7.14□□□□□ -1.27
SMC4-215ENST00000484799 FITM1A5D6W6 292 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 CLEC3AO75596 197 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 ATE1O95260 518 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 SRFP11831 508 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 RPL10P27635 214 aaKnown RBP7.13□□□□□ -1.27
SMC4-215ENST00000484799 ZNF76P36508 570 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 NMIQ13287 307 aaPredicted RBP7.13□□□□□ -1.27
SMC4-215ENST00000484799 GAB4Q2WGN9 574 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 TMEM132EQ6IEE7 984 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 KIAA0825Q8IV33 1275 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 LILRA2Q8N149 483 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 REXO1Q8N1G1 1221 aaKnown RBP7.13□□□□□ -1.27
SMC4-215ENST00000484799 BHLHE22Q8NFJ8 381 aaPredicted RBP7.13□□□□□ -1.27
SMC4-215ENST00000484799 LRRC3Q9BY71 257 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMC4-215ENST00000484799 FBXL21Q9UKT6 434 aa7.13□□□□□ -1.27
SMC4-215ENST00000484799 ZNF16P17020 682 aaPredicted RBP7.12□□□□□ -1.27
SMC4-215ENST00000484799 PCBP3P57721 371 aaKnown RBP7.12□□□□□ -1.27
SMC4-215ENST00000484799 ERVFC1P60507 584 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 CHRNEQ04844 493 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 MRPL58Q14197 206 aaKnown RBP7.12□□□□□ -1.27
SMC4-215ENST00000484799 SLC14A2Q15849 920 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 FBXW10Q5XX13 1052 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 ZSCAN18Q8TBC5 510 aaPredicted RBP7.12□□□□□ -1.27
SMC4-215ENST00000484799 KCNN1Q92952 543 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 TOX2Q96NM4 488 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 EHMT1Q9H9B1 1298 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
SMC4-215ENST00000484799 HPXP02790 462 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 NLRC3Q7RTR2 1065 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 NT5C1AQ9BXI3 368 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 MKRN2Q9H000 416 aaKnown RBP7.11□□□□□ -1.27
SMC4-215ENST00000484799 C19orf44Q9H6X5 657 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 KCNQ5Q9NR82 932 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 ADAMTS1Q9UHI8 967 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 GPR160Q9UJ42 338 aa7.11□□□□□ -1.27
SMC4-215ENST00000484799 RBM47A0AV96 593 aaKnown RBP7.1□□□□□ -1.27
SMC4-215ENST00000484799 TRHRP34981 398 aaPredicted RBP7.1□□□□□ -1.27
SMC4-215ENST00000484799 PDE6BP35913 854 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 CCNFP41002 786 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
SMC4-215ENST00000484799 CLCQ05315 142 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 MESP2Q0VG99 397 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 CDCP2Q5VXM1 449 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 OVOS1Q6IE37 1185 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 RNF111Q6ZNA4 994 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 WAPLQ7Z5K2 1190 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 ZNF655Q8N720 491 aaPredicted RBP7.1□□□□□ -1.27
SMC4-215ENST00000484799 ANKS4BQ8N8V4 417 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 SYTL5Q8TDW5 730 aaPredicted RBP7.1□□□□□ -1.27
SMC4-215ENST00000484799 ATG4CQ96DT6 458 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 DHRS1Q96LJ7 313 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 FERD3LQ96RJ6 166 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 SLC6A17Q9H1V8 727 aa7.1□□□□□ -1.27
SMC4-215ENST00000484799 RBAK-RBAKDNI3L0D1 243 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 DNAJA2O60884 412 aa7.09□□□□□ -1.27
SMC4-215ENST00000484799 ZGLP1P0C6A0 271 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms