RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 NUDT12Q9BQG2 462 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 TTYH1Q9H313 450 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-221ENST00000484566 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-221ENST00000484566 GJD2Q9UKL4 321 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 GAKO14976 1311 aa10.58□□□□□ -0.72
DDX39B-221ENST00000484566 BTDP43251 543 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 HMGCS2P54868 508 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-221ENST00000484566 SPP2Q13103 211 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 MAP3K21Q5TCX8 1036 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
DDX39B-221ENST00000484566 OSBPL5Q9H0X9 879 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-221ENST00000484566 ASCC2Q9H1I8 757 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-221ENST00000484566 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDX39B-221ENST00000484566 AS3MTQ9HBK9 375 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 PRKAG2Q9UGJ0 569 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-221ENST00000484566 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 ZDBF2Q9HCK1 2354 aa10.57□□□□□ -0.72
DDX39B-221ENST00000484566 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 USP34Q70CQ2 3546 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 COL6A1P12109 1028 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 XRCC5P13010 732 aaKnown RBP10.56□□□□□ -0.72
DDX39B-221ENST00000484566 LRRC26Q2I0M4 334 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 TMEM31Q5JXX7 168 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 EPHX3Q9H6B9 360 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 DDX4Q9NQI0 724 aaKnown RBP10.56□□□□□ -0.72
DDX39B-221ENST00000484566 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 ABCF2Q9UG63 623 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 CACNA1BQ00975 2339 aa10.56□□□□□ -0.72
DDX39B-221ENST00000484566 PKD1L2Q7Z442 2459 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 FAM196BA6NMK8 535 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 CFHP08603 1231 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 SLURP2P0DP57 97 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 RGS2P41220 211 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 SPTY2D1Q68D10 685 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-221ENST00000484566 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
DDX39B-221ENST00000484566 TMOD4Q9NZQ9 345 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 CEP126Q9P2H0 1117 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 MROH7-TTC4A0A0A0MT08 1334 aa10.55□□□□□ -0.72
DDX39B-221ENST00000484566 USP17L5A8MUK1 530 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 TRIM66O15016 1216 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 CIAO1O76071 339 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 MAPK4P31152 587 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 PHKA1P46020 1223 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 MRPS5P82675 430 aaKnown RBP10.54□□□□□ -0.72
DDX39B-221ENST00000484566 AMHR2Q16671 573 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 SH3D19Q5HYK7 790 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
DDX39B-221ENST00000484566 APBA2Q99767 749 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 SIL1Q9H173 461 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 BAHCC1Q9P281 2608 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 PTPRCP08575 1304 aa10.54□□□□□ -0.72
DDX39B-221ENST00000484566 XIRP2A4UGR9 3374 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 GPR37L1O60883 481 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 CCND3P30281 292 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-221ENST00000484566 CAP2P40123 477 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 RFX5P48382 616 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-221ENST00000484566 KCNC4Q03721 635 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 CACNB2Q08289 660 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-221ENST00000484566 MTMR2Q13614 643 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 CCDC102BQ68D86 513 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 ATG9AQ7Z3C6 839 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 LTBP2Q14767 1821 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
DDX39B-221ENST00000484566 REV3LO60673 3130 aa10.53□□□□□ -0.72
DDX39B-221ENST00000484566 SPTBN4Q9H254 2564 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 GPR75-ASB3A0A0A6YYF3 556 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 ACTN4O43707 911 aaKnown RBP10.52□□□□□ -0.73
DDX39B-221ENST00000484566 MSCO60682 206 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 MAP4K4O95819 1239 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-221ENST00000484566 IL15P40933 162 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-221ENST00000484566 HERVK_113P62684 666 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 RASGRF1Q13972 1273 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 MFSD14CQ5VZR4 134 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 GPR142Q7Z601 462 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 SENP6Q9GZR1 1112 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-221ENST00000484566 USP44Q9H0E7 712 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 THEGQ9P2T0 379 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 HERC5Q9UII4 1024 aaKnown RBP10.52□□□□□ -0.73
DDX39B-221ENST00000484566 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.73
DDX39B-221ENST00000484566 GLRX3O76003 335 aaKnown RBP10.51□□□□□ -0.73
DDX39B-221ENST00000484566 LDHCP07864 332 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 ASNSP08243 561 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 ADORA1P30542 326 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 HOXA7P31268 230 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-221ENST00000484566 BACE1P56817 501 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 RHBDL3P58872 404 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 ERVK-24P63145 666 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 GSTO1P78417 241 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 CCL14Q16627 93 aa10.51□□□□□ -0.73
DDX39B-221ENST00000484566 PLEKHH3Q7Z736 793 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms