RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
SCAF11-207ENST00000484275 COPRSQ9NQ92 184 aa8.11□□□□□ -1.11
SCAF11-207ENST00000484275 KCNH3Q9ULD8 1083 aa8.11□□□□□ -1.11
SCAF11-207ENST00000484275 MPP2Q14168 576 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 VWCEQ96DN2 955 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 RNF32Q9H0A6 362 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 MRS2Q9HD23 443 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 KBTBD4Q9NVX7 518 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 EBF1Q9UH73 591 aa8.1□□□□□ -1.11
SCAF11-207ENST00000484275 TNNI2P48788 182 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 FBXL19Q6PCT2 694 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 LCNL1Q6ZST4 164 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 ERMP1Q7Z2K6 904 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 CCDC74BQ96LY2 380 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 KIF2CQ99661 725 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 EPB41L4BQ9H329 900 aa8.09□□□□□ -1.11
SCAF11-207ENST00000484275 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
SCAF11-207ENST00000484275 RBM47A0AV96 593 aaKnown RBP8.08□□□□□ -1.12
SCAF11-207ENST00000484275 TLR3O15455 904 aaKnown RBP8.08□□□□□ -1.12
SCAF11-207ENST00000484275 LTKP29376 864 aa8.08□□□□□ -1.12
SCAF11-207ENST00000484275 DIEXFQ68CQ4 756 aaKnown RBP8.08□□□□□ -1.12
SCAF11-207ENST00000484275 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
SCAF11-207ENST00000484275 PDZD8Q8NEN9 1154 aa8.08□□□□□ -1.12
SCAF11-207ENST00000484275 ASPNQ9BXN1 380 aa8.08□□□□□ -1.12
SCAF11-207ENST00000484275 PWP1Q13610 501 aa8.07□□□□□ -1.12
SCAF11-207ENST00000484275 PHACTR4Q8IZ21 702 aa8.07□□□□□ -1.12
SCAF11-207ENST00000484275 TOX2Q96NM4 488 aa8.07□□□□□ -1.12
SCAF11-207ENST00000484275 KCNQ5Q9NR82 932 aa8.07□□□□□ -1.12
SCAF11-207ENST00000484275 TEKQ02763 1124 aa8.06□□□□□ -1.12
SCAF11-207ENST00000484275 KRTAP19-4Q3LI73 84 aa8.06□□□□□ -1.12
SCAF11-207ENST00000484275 ANKLE2Q86XL3 938 aa8.06□□□□□ -1.12
SCAF11-207ENST00000484275 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
SCAF11-207ENST00000484275 ZNF281Q9Y2X9 895 aa8.06□□□□□ -1.12
SCAF11-207ENST00000484275 SLC22A31A6NKX4 558 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 ETV2O00321 342 aaPredicted RBP8.05□□□□□ -1.12
SCAF11-207ENST00000484275 NFIBO00712 420 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 UBOX5O94941 541 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 MED14OSP0DP75 135 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 CRKP46108 304 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 CCDC27Q2M243 656 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
SCAF11-207ENST00000484275 KRTAP9-7A8MTY7 169 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 NPIPB6E9PJ23 425 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 RGS13O14921 159 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 GREM1O60565 184 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 EFEMP2O95967 443 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 ARSHQ5FYA8 562 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 G6PC3Q9BUM1 346 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 LRRC3Q9BY71 257 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 GZF1Q9H116 711 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-207ENST00000484275 PCDHB14Q9Y5E9 798 aa8.04□□□□□ -1.12
SCAF11-207ENST00000484275 FITM1A5D6W6 292 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 TMEM253P0C7T8 217 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 GBP1P32455 592 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 EIF4A3P38919 411 aaKnown RBP8.03□□□□□ -1.12
SCAF11-207ENST00000484275 GALK1P51570 392 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 NR0B2Q15466 257 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 LILRA2Q8N149 483 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 OXR1Q8N573 874 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 LINC01599Q8WXQ3 324 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 SHISA4Q96DD7 197 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 HDAC8Q9BY41 377 aa8.03□□□□□ -1.12
SCAF11-207ENST00000484275 NOTOA8MTQ0 251 aa8.02□□□□□ -1.13
SCAF11-207ENST00000484275 ERCC3P19447 782 aa8.02□□□□□ -1.13
SCAF11-207ENST00000484275 GLDCP23378 1020 aa8.02□□□□□ -1.13
SCAF11-207ENST00000484275 POLR2BP30876 1174 aaKnown RBP8.02□□□□□ -1.13
SCAF11-207ENST00000484275 CWF19L2Q2TBE0 894 aaKnown RBP8.02□□□□□ -1.13
SCAF11-207ENST00000484275 USHBP1Q8N6Y0 703 aa8.02□□□□□ -1.13
SCAF11-207ENST00000484275 ZSCAN18Q8TBC5 510 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-207ENST00000484275 KRTAP4-9Q9BYQ8 210 aa8.02□□□□□ -1.13
SCAF11-207ENST00000484275 PSPNO60542 156 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 ATE1O95260 518 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 ZSCAN22P10073 491 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 NMIQ13287 307 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 SNW1Q13573 536 aaKnown RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 MRPL58Q14197 206 aaKnown RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 KCNA10Q16322 511 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 CLEC16AQ2KHT3 1053 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 OVOS1Q6IE37 1185 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 TMC3Q7Z5M5 1100 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 ZNF296Q8WUU4 475 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 DHX38Q92620 1227 aaKnown RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 ADAMTS1Q9UHI8 967 aa8.01□□□□□ -1.13
SCAF11-207ENST00000484275 YBX2Q9Y2T7 364 aaKnown RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
SCAF11-207ENST00000484275 ROBO2Q9HCK4 1378 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 MYOCOSA0A1B0GUC4 107 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 NBPF12Q5TAG4 269 aaPredicted RBP8□□□□□ -1.13
SCAF11-207ENST00000484275 IRF2BP1Q8IU81 584 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 SYTL5Q8TDW5 730 aaPredicted RBP8□□□□□ -1.13
SCAF11-207ENST00000484275 KCNN1Q92952 543 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 INTS4Q96HW7 963 aaKnown RBP8□□□□□ -1.13
SCAF11-207ENST00000484275 SLC26A8Q96RN1 970 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 MCOLN1Q9GZU1 580 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 GMIPQ9P107 970 aa8□□□□□ -1.13
SCAF11-207ENST00000484275 SMG5Q9UPR3 1016 aaKnown RBP8□□□□□ -1.13
SCAF11-207ENST00000484275 RAG1P15918 1043 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms