RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SUGT1Q9Y2Z0 365 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 V9GY48 417 aaPredicted RBP8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 LTBP1Q14766 1721 aa8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.06
SHROOM3-206ENST00000484236 GPR75-ASB3A0A0A6YYF3 556 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 TTLL13PA6NNM8 815 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 UBE2Q2LH0YL09 131 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 NRDCO43847 1150 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 PRDM1O75626 825 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 SCG2P13521 617 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 MYL5Q02045 173 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 GALNT17Q6IS24 598 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 METTL16Q86W50 562 aaKnown RBP8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 LRRC8AQ8IWT6 810 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 MLKLQ8NB16 471 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC150Q8NCX0 1101 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 TNFRSF25Q93038 417 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 CLIC6Q96NY7 704 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 KAT14Q9H8E8 782 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 CD209Q9NNX6 404 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 CABP5Q9NP86 173 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 LRRC4BQ9NT99 713 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 PYCARDQ9ULZ3 195 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 PCDHB6Q9Y5E3 794 aa8.45□□□□□ -1.06
SHROOM3-206ENST00000484236 MYH1P12882 1939 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 QSER1Q2KHR3 1735 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 NRXN2Q9P2S2 1712 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 UFL1O94874 794 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 SMC2O95347 1197 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 PLEKHA8P1O95397 391 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 USP17L8P0C7I0 530 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 KCNJ6P48051 423 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 GPSM2P81274 684 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 MDM2Q00987 491 aaPredicted RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 TFAP4Q01664 338 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 NR5A1Q13285 461 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 GRM4Q14833 912 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 NCAPHQ15003 741 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 POSTNQ15063 836 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 LONRF3Q496Y0 759 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 FAM182BQ5T319 152 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 RCSD1Q6JBY9 416 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 SP8Q8IXZ3 490 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 ZNF444Q8N0Y2 327 aaPredicted RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 CMTR1Q8N1G2 835 aaKnown RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC82Q8N4S0 544 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 MPNDQ8N594 471 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 SRBD1Q8N5C6 995 aaKnown RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 MYRIPQ8NFW9 859 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 OXER1Q8TDS5 423 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 CACTINQ8WUQ7 758 aaKnown RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 RTFDC1Q9BY42 306 aaPredicted RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 MKNK2Q9HBH9 465 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 VPS54Q9P1Q0 977 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 BRWD3Q6RI45 1802 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 FAM205AQ6ZU69 1335 aa8.44□□□□□ -1.06
SHROOM3-206ENST00000484236 UQCRHLA0A096LP55 91 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 SMIM22K7EJ46 135 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 KIF2AO00139 706 aaPredicted RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 POLR2DO15514 142 aaKnown RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 UQCRHP07919 91 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 TSPY3P0CV98 308 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 TSPY8P0CW00 308 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 CYP2D6P10635 497 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 ERCC5P28715 1186 aaPredicted RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 GTF2F1P35269 517 aaKnown RBP eCLIP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 SARSP49591 514 aaKnown RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 ATP2C1P98194 919 aaPredicted RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 PNOCQ13519 176 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 FAM47AQ5JRC9 791 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 TTC38Q5R3I4 469 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 ARL6IP4Q66PJ3 421 aaKnown RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 MTERF4Q7Z6M4 381 aaKnown RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 DAGLBQ8NCG7 672 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 CCDC148Q8NFR7 591 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 ERCC4Q92889 916 aaPredicted RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 SMARCE1Q969G3 411 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 MAP7D2Q96T17 732 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 NRBP1Q9UHY1 535 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 PCDHA5Q9Y5H7 936 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 GAKO14976 1311 aa8.43□□□□□ -1.06
SHROOM3-206ENST00000484236 POLRMTO00411 1230 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 BIN1O00499 593 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 RRP9O43818 475 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 TUBB4AP04350 444 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 SLFN14P0C7P3 912 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 BTDP43251 543 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 NLRP5P59047 1200 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 FANCCQ00597 558 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 SEMA3FQ13275 785 aa8.42□□□□□ -1.06
SHROOM3-206ENST00000484236 MORC3Q14149 939 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms