RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 OS9Q13438 667 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-215ENST00000484203 DGKZQ13574 1117 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 PRKG1Q13976 671 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 CCDC158Q5M9N0 1113 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 MOB2Q70IA6 237 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 CERS3Q8IU89 383 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 ITPRIPQ8IWB1 547 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 TMEM57Q8N5G2 664 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 FAM151AQ8WW52 585 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 WNK4Q96J92 1243 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 NEUROD6Q96NK8 337 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 ZIC5Q96T25 663 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 ZCCHC17Q9NP64 241 aaKnown RBP7.56□□□□□ -1.2
PTCD3-215ENST00000484203 SCAF8Q9UPN6 1271 aaKnown RBP7.56□□□□□ -1.2
PTCD3-215ENST00000484203 PA2G4Q9UQ80 394 aaKnown RBP7.56□□□□□ -1.2
PTCD3-215ENST00000484203 THSD7BQ9C0I4 1608 aa7.56□□□□□ -1.2
PTCD3-215ENST00000484203 SCN9AQ15858 1988 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 MYH3P11055 1940 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 GPR25O00155 361 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 FKTNO75072 461 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 HMMRO75330 724 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 ENTPD3O75355 529 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 CETPP11597 493 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 PHKA1P46020 1223 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 TIMM10P62072 90 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 TFCP2Q12800 502 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 RASGRF1Q13972 1273 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-215ENST00000484203 SSH3Q8TE77 659 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
PTCD3-215ENST00000484203 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 NOL10Q9BSC4 688 aaKnown RBP7.55□□□□□ -1.2
PTCD3-215ENST00000484203 IDI2Q9BXS1 227 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 ZNF341Q9BYN7 854 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 MCOLN1Q9GZU1 580 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 TMEM39BQ9GZU3 492 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 NOP58Q9Y2X3 529 aaKnown RBP7.55□□□□□ -1.2
PTCD3-215ENST00000484203 DAGLAQ9Y4D2 1042 aa7.55□□□□□ -1.2
PTCD3-215ENST00000484203 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-215ENST00000484203 SURF6O75683 361 aaKnown RBP7.54□□□□□ -1.2
PTCD3-215ENST00000484203 BAG3O95817 575 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-215ENST00000484203 PRDX5P30044 214 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 SNAPC2Q13487 334 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 CDC42EP5Q6NZY7 148 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 SPATA5Q8NB90 893 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTCD3-215ENST00000484203 OPTNQ96CV9 577 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 WRNIP1Q96S55 665 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 ABCF2Q9UG63 623 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 DDX19BQ9UMR2 479 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 PCDHAC2Q9Y5I4 1007 aa7.54□□□□□ -1.2
PTCD3-215ENST00000484203 GAKO14976 1311 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 CCDC85CA6NKD9 419 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 TBC1D8O95759 1140 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 ADORA1P30542 326 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 PPATQ06203 517 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 VGLL4Q14135 290 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 GRIK5Q16478 980 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-215ENST00000484203 RPAP2Q8IXW5 612 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-215ENST00000484203 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 ADAMTS19Q8TE59 1207 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 ZNF296Q8WUU4 475 aaPredicted RBP7.53□□□□□ -1.2
PTCD3-215ENST00000484203 GLMNQ92990 594 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 ERO1AQ96HE7 468 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 CLMNQ96JQ2 1002 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 CALR3Q96L12 384 aaKnown RBP7.53□□□□□ -1.2
PTCD3-215ENST00000484203 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 ZFYVE28Q9HCC9 887 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 LRP2BPQ9P2M1 347 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
PTCD3-215ENST00000484203 GPR75-ASB3A0A0A6YYF3 556 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 GNRH1P01148 92 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 RGS19P49795 217 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 CACNB3P54284 484 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 CBLBQ13191 982 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 PPIL2Q13356 520 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 TSGA10IPQ3SY00 556 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 NOL9Q5SY16 702 aaKnown RBP7.52□□□□□ -1.21
PTCD3-215ENST00000484203 FBXO46Q6PJ61 603 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-215ENST00000484203 ZSCAN29Q8IWY8 852 aaPredicted RBP7.52□□□□□ -1.21
PTCD3-215ENST00000484203 PICK1Q9NRD5 415 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 RAI14Q9P0K7 980 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 HMG20BQ9P0W2 317 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 GMPR2Q9P2T1 348 aaKnown RBP7.52□□□□□ -1.21
PTCD3-215ENST00000484203 ZNF112Q9UJU3 913 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms