RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 PLS1Q14651 629 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 MORN1Q5T089 497 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 KBTBD3Q8NAB2 608 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 OSBP2Q969R2 916 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 APBA2Q99767 749 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 CRISPLD2Q9H0B8 497 aa23.06■■□□□ 1.28
NDUFA3-213ENST00000484103 EVI5O60447 810 aa23.05■■□□□ 1.28
NDUFA3-213ENST00000484103 CCND3P30281 292 aaPredicted RBP23.05■■□□□ 1.28
NDUFA3-213ENST00000484103 CACNB2Q08289 660 aaPredicted RBP23.05■■□□□ 1.28
NDUFA3-213ENST00000484103 C16orf86Q6ZW13 317 aa23.05■■□□□ 1.28
NDUFA3-213ENST00000484103 STRBPQ96SI9 672 aaKnown RBP23.05■■□□□ 1.28
NDUFA3-213ENST00000484103 IVNS1ABPQ9Y6Y0 642 aa23.05■■□□□ 1.28
NDUFA3-213ENST00000484103 M0R2C6 588 aa23.04■■□□□ 1.28
NDUFA3-213ENST00000484103 FLOT1O75955 427 aa23.04■■□□□ 1.28
NDUFA3-213ENST00000484103 APPP05067 770 aa23.04■■□□□ 1.28
NDUFA3-213ENST00000484103 MAP2K5Q13163 448 aa23.04■■□□□ 1.28
NDUFA3-213ENST00000484103 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
NDUFA3-213ENST00000484103 RNF113AO15541 343 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 GLRX3O76003 335 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 XRCC5P13010 732 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 EEF2P13639 858 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 COG2Q14746 738 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 NECAB2Q7Z6G3 386 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 APPBP2Q92624 585 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 USP6NLQ92738 828 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 ATG4CQ96DT6 458 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 FLRT1Q9NZU1 646 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 ARPP21Q9UBL0 812 aaPredicted RBP23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 NR2E3Q9Y5X4 410 aa23.03■■□□□ 1.28
NDUFA3-213ENST00000484103 GSG1L2A8MUP6 293 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 GPAA1O43292 621 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 PTPREP23469 700 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 TDO2P48775 406 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 C7orf61Q8IZ16 206 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 CCDC17Q96LX7 622 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 MOV10L1Q9BXT6 1211 aaKnown RBP23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 SH2D4AQ9H788 454 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 VCPKMTQ9H867 229 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 PCDH10Q9P2E7 1040 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 TMX2Q9Y320 296 aa23.02■■□□□ 1.28
NDUFA3-213ENST00000484103 MAP3K21Q5TCX8 1036 aa23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 LBX2Q6XYB7 198 aa23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 NPLOC4Q8TAT6 608 aa23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 SEC62Q99442 399 aaKnown RBP23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 FSD1Q9BTV5 496 aa23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 MKNK2Q9HBH9 465 aa23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 EPB41L4AQ9HCS5 686 aaPredicted RBP23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 HOXC10Q9NYD6 342 aa23.01■■□□□ 1.27
NDUFA3-213ENST00000484103 SLC15A5A6NIM6 579 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 PRDM1O75626 825 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 ERCC3P19447 782 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 CNGA1P29973 690 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 NCAPG2Q86XI2 1143 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 TRMT44Q8IYL2 757 aaKnown RBP23■■□□□ 1.27
NDUFA3-213ENST00000484103 SPATC1LQ9H0A9 340 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 FBXO28Q9NVF7 368 aa23■■□□□ 1.27
NDUFA3-213ENST00000484103 RBM27Q9P2N5 1060 aaKnown RBP23■■□□□ 1.27
NDUFA3-213ENST00000484103 ZBTB47Q9UFB7 747 aaPredicted RBP23■■□□□ 1.27
NDUFA3-213ENST00000484103 CYP2C19P33261 490 aa22.99■■□□□ 1.27
NDUFA3-213ENST00000484103 MFSD14CQ5VZR4 134 aa22.99■■□□□ 1.27
NDUFA3-213ENST00000484103 DPP9Q86TI2 863 aa22.99■■□□□ 1.27
NDUFA3-213ENST00000484103 LPAR1Q92633 364 aa22.99■■□□□ 1.27
NDUFA3-213ENST00000484103 NBPF3Q9H094 633 aa22.99■■□□□ 1.27
NDUFA3-213ENST00000484103 C11orf49Q9H6J7 331 aa22.99■■□□□ 1.27
NDUFA3-213ENST00000484103 ERC2O15083 957 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 ADORA2AP29274 412 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 DSG3P32926 999 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 FXR1P51114 621 aaKnown RBP eCLIP22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 GRB14Q14449 540 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 FAM83BQ5T0W9 1011 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 ANKRD45Q5TZF3 282 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 PI4K2BQ8TCG2 481 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 NUP88Q99567 741 aaPredicted RBP22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 KANSL2Q9H9L4 492 aa22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 ZMYND8Q9ULU4 1186 aaPredicted RBP22.98■■□□□ 1.27
NDUFA3-213ENST00000484103 WDR46O15213 610 aaKnown RBP22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 ZFYP08048 801 aaPredicted RBP22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 MX1P20591 662 aa22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 CHMP4CQ96CF2 233 aa22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 GOPCQ9HD26 462 aa22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 OGDHLQ9ULD0 1010 aa22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 TTC41PQ6P2S7 1318 aa22.97■■□□□ 1.27
NDUFA3-213ENST00000484103 ALPK3Q96L96 1907 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 CEP290O15078 2479 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 SYN1P17600 705 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 RASA1P20936 1047 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 SLC4A3P48751 1232 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 MNX1P50219 401 aaPredicted RBP22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 ANKLE1Q8NAG6 615 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 A0A0G2JMZ2 1700 aa22.96■■□□□ 1.27
NDUFA3-213ENST00000484103 MYCNP04198 464 aaPredicted RBP22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 RLFQ13129 1914 aa22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 TMEM132BQ14DG7 1078 aa22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 SBK1Q52WX2 424 aa22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 ANO1Q5XXA6 986 aa22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 CCDC129Q6ZRS4 1044 aa22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 STAP2Q9UGK3 403 aa22.95■■□□□ 1.26
NDUFA3-213ENST00000484103 GNAT2P19087 354 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms