RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 FAM173BQ6P4H8 233 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 TTC4O95801 387 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 KLC1Q07866 573 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 RASA3Q14644 834 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 WBP4O75554 376 aaKnown RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 MCM10Q7L590 875 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 AMFRQ9UKV5 643 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 ENC1O14682 589 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 GIPC1O14908 333 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 CC2D1AQ6P1N0 951 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 IL17RAQ96F46 866 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 ZNF189O75820 626 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 HARSP12081 509 aaKnown RBP11.26□□□□□ -0.61
COL12A1-207ENST00000483888 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 ZKSCAN3Q9BRR0 538 aa11.26□□□□□ -0.61
COL12A1-207ENST00000483888 TMEM154Q6P9G4 183 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 MYLK4Q86YV6 388 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ZNF444Q8N0Y2 327 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ERMNQ8TAM6 284 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 SNRNP27Q8WVK2 155 aaKnown RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 CASP10Q92851 521 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ECT2Q9H8V3 914 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 BUB1O43683 1085 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 GGCXP38435 758 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 PNOCQ13519 176 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 RPS6KA2Q15349 733 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 MCMDC2Q4G0Z9 681 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 TRIML1Q8N9V2 468 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 PLIN2Q99541 437 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 TYW1Q9NV66 732 aaKnown RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 STX10O60499 249 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 WDR78Q5VTH9 848 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ATP6V0A1Q93050 837 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 TBC1D23Q9NUY8 699 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ATP5HO75947 161 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 STAMBPL1Q96FJ0 436 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ELAC2Q9BQ52 826 aaKnown RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 BRD1O95696 1058 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 SFMBT2Q5VUG0 894 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 PACSIN2Q9UNF0 486 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-207ENST00000483888 TRAF5O00463 557 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 PPP2R5CQ13362 524 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 EFHD1Q9BUP0 239 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 ARHGEF18Q6ZSZ5 1173 aa11.25□□□□□ -0.61
COL12A1-207ENST00000483888 CPA1P15085 419 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 PPP1R2P41236 205 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 TRPC1P48995 793 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 IFIT1BQ5T764 474 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 PALM2Q8IXS6 379 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 KAT14Q9H8E8 782 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 CHMLP26374 656 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 HNRNPH1P31943 449 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 HDLBPQ00341 1268 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 HFM1A2PYH4 1435 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 DCTN3O75935 186 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 PKP1Q13835 747 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 ZNF354CQ86Y25 554 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 HAUS2Q9NVX0 235 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 MYO1AQ9UBC5 1043 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 EPB41P11171 864 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 CYLC2Q14093 348 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 TRMT1LQ7Z2T5 733 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 KRT8P05787 483 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 ESRRAP11474 423 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 KRT5P13647 590 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 DRP2Q13474 957 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 TMEM259Q4ZIN3 620 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 ICA1LQ8NDH6 482 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 STRIP2Q9ULQ0 834 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 GYG2O15488 501 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 AP2B1P63010 937 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 CASC4Q6P4E1 433 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 TRPC5Q9UL62 973 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 EEF1GP26641 437 aaKnown RBP11.24□□□□□ -0.61
COL12A1-207ENST00000483888 STRN3Q13033 797 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 RRAGAQ7L523 313 aa11.24□□□□□ -0.61
COL12A1-207ENST00000483888 SLC7A5Q01650 507 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 ARHGAP44Q17R89 818 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
COL12A1-207ENST00000483888 ATP8A1Q9Y2Q0 1164 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms