RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CTDNEP1O95476 244 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 CAPN2P17655 700 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 NCLP19338 710 aaKnown RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 PRDX5P30044 214 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 FKBP1AP62942 108 aaKnown RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 LDLRAD1Q5T700 205 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 MCTP1Q6DN14 999 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 CTR9Q6PD62 1173 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 CPLX2Q6PUV4 134 aaKnown RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 SYNE3Q6ZMZ3 975 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 DZIP1Q86YF9 867 aaKnown RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 MIGA1Q8NAN2 632 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 FAM184AQ8NB25 1140 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 TRIM47Q96LD4 638 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 PTPN18Q99952 460 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 ARHGAP39Q9C0H5 1083 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 TTYH1Q9H313 450 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 ZNF287Q9HBT7 754 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 ZFYVE28Q9HCC9 887 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 DCP1AQ9NPI6 582 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 ARPP21Q9UBL0 812 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 BRPF3Q9ULD4 1205 aa6.32□□□□□ -1.4
COL17A1-206ENST00000483876 DDX49Q9Y6V7 483 aaKnown RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 ZNF646O15015 1829 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-206ENST00000483876 NID2Q14112 1375 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 BDP1A6H8Y1 2624 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 DUOX1Q9NRD9 1551 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 ELP1O95163 1332 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 KLF18A0A0U1RQI7 1052 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 ERICH2A1L162 156 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 FAM86C2PA6NEL3 165 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 B4E1Z4 1266 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 USP17L12C9JPN9 530 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 USP17L21D6R901 530 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 CPLX1O14810 134 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 IFIT3O14879 490 aaKnown RBP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 KDM4AO75164 1064 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 FDPSP14324 419 aaKnown RBP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 DYNLL1P63167 89 aaKnown RBP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 MDM2Q00987 491 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 CTDSPL2Q05D32 466 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 PDE4BQ07343 736 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 CHAF1AQ13111 956 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 STK3Q13188 491 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 MAP3K11Q16584 847 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 TMEM67Q5HYA8 995 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 C12orf60Q5U649 245 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 APOA5Q6Q788 366 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 HHIPL2Q6UWX4 724 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 CYB5R4Q7L1T6 521 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 CHST3Q7LGC8 479 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 RAET1EQ8TD07 263 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 PPM1EQ8WY54 764 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 WASF1Q92558 559 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 ANKS1AQ92625 1134 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 WNK4Q96J92 1243 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 NOL10Q9BSC4 688 aaKnown RBP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 LRRC2Q9BYS8 371 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 UNC93B1Q9H1C4 597 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 LY9Q9HBG7 655 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 TCP11L1Q9NUJ3 509 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 CFAP45Q9UL16 551 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
COL17A1-206ENST00000483876 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
COL17A1-206ENST00000483876 LRRC37AA6NMS7 1700 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 MYO5AQ9Y4I1 1855 aaKnown RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 MROH7-TTC4A0A0A0MT08 1334 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 GAKO14976 1311 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 FSD2A1L4K1 749 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 CCDC69A6NI79 296 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 MINDY4BA8MYZ0 360 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 SMIM22K7EJ46 135 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 ZBTB43O43298 467 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 LETM1O95202 739 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 CALM1P0DP23 149 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 CALM2P0DP24 149 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 CALM3P0DP25 149 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 IFNAR1P17181 557 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 DEKP35659 375 aaKnown RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 UBE2HP62256 183 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 CCT2P78371 535 aaKnown RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 KRT85P78386 507 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 LACTBP83111 547 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 C1QBPQ07021 282 aaKnown RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 WTAPQ15007 396 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 SEC23AQ15436 765 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 TAF1CQ15572 869 aaPredicted RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 NTRK3Q16288 839 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 L1TD1Q5T7N2 865 aaKnown RBP6.3□□□□□ -1.4
COL17A1-206ENST00000483876 STRIP1Q5VSL9 837 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 POTEHQ6S545 545 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 IQCA1Q86XH1 822 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 DGKHQ86XP1 1220 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 AMOTL1Q8IY63 956 aa6.3□□□□□ -1.4
COL17A1-206ENST00000483876 FBXO18Q8NFZ0 1043 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms