RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 ZAP70P43403 619 aa13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 G3BP1Q13283 466 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 C1orf53Q5VUE5 145 aa13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 TRMT2AQ8IZ69 625 aaKnown RBP13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 EHD4Q9H223 541 aa13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 SERPINB13Q9UIV8 391 aa13.31□□□□□ -0.28
SMARCC1-205ENST00000483847 TMEM265A0A087WTH1 108 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 STRNO43815 780 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 ERCC3P19447 782 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 SHMT1P34896 483 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 EVX2Q03828 476 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 TNNI3KQ59H18 835 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 SPATC1LQ9H0A9 340 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 FPGT-TNNI3KV9GXZ4 949 aa13.3□□□□□ -0.28
SMARCC1-205ENST00000483847 SMCHD1A6NHR9 2005 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 KIAA0355O15063 1070 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 CLTBP09497 229 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 DNAJB2P25686 324 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 USP5P45974 858 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 PLCD1P51178 756 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 COG2Q14746 738 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 SEPT2Q15019 361 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 KIAA1755Q5JYT7 1200 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 MAML3Q96JK9 1138 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 TANGO6Q9C0B7 1094 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
SMARCC1-205ENST00000483847 PQBP1O60828 265 aaKnown RBP13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 GNAI2P04899 355 aa13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 RAG1P15918 1043 aa13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 FPGSQ05932 587 aa13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 ZNF512BQ96KM6 892 aaPredicted RBP13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 ZNF576Q9H609 170 aa13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 CABP5Q9NP86 173 aa13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 GPR108Q9NPR9 543 aa13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
SMARCC1-205ENST00000483847 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 PGK1P00558 417 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 TAL1P17542 331 aaPredicted RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 PLS1Q14651 629 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 TTC6Q86TZ1 520 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 NCAPG2Q86XI2 1143 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 MAGEB6Q8N7X4 407 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 LENG1Q96BZ8 264 aaPredicted RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 XPNPEP3Q9NQH7 507 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 HOXC10Q9NYD6 342 aa13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 DBNLQ9UJU6 430 aaKnown RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 ZNFX1Q9P2E3 1918 aaKnown RBP13.27□□□□□ -0.29
SMARCC1-205ENST00000483847 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 FAAP100Q0VG06 881 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 PARP14Q460N5 1801 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 NAV1Q8NEY1 1877 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 TIFAQ96CG3 184 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 ATG4CQ96DT6 458 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 MROH8Q9H579 483 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 ANTXR1Q9H6X2 564 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 REV3LO60673 3130 aa13.26□□□□□ -0.29
SMARCC1-205ENST00000483847 GRXCR1A8MXD5 290 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 PGK2P07205 417 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 RARBP10826 455 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 DSG3P32926 999 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 PBX2P40425 430 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 GABPAQ06546 454 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 POLA2Q14181 598 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■□□□□ 8.9
SMARCC1-205ENST00000483847 SLC5A4Q9NY91 659 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 NCOR1O75376 2440 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 PLXNA1Q9UIW2 1896 aa13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 COL11A1P12107 1806 aaPredicted RBP13.25□□□□□ -0.29
SMARCC1-205ENST00000483847 CHD7Q9P2D1 2997 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 IGSF3O75054 1194 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 FCER1AP12319 257 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 TRIM27P14373 513 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 C16orf59Q7L2K0 433 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 RNF180Q86T96 592 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 SIAH1Q8IUQ4 282 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 SPICE1Q8N0Z3 855 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 ADAMTS19Q8TE59 1207 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 ASB2Q96Q27 587 aa13.24□□□□□ -0.29
SMARCC1-205ENST00000483847 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms