RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ARMT1Q9H993 441 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 ZNFX1Q9P2E3 1918 aaKnown RBP16.86■□□□□ 0.29
VARS-226ENST00000483275 CYP2D7A0A087X1C5 515 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 SLC15A5A6NIM6 579 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 PRKAB2O43741 272 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 IGSF3O75054 1194 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
VARS-226ENST00000483275 GRB14Q14449 540 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 MFSD14CQ5VZR4 134 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 ANO1Q5XXA6 986 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 DEFB123Q8N688 67 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 SLC17A8Q8NDX2 589 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 IVNS1ABPQ9Y6Y0 642 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 UNC80Q8N2C7 3258 aa16.86■□□□□ 0.29
VARS-226ENST00000483275 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
VARS-226ENST00000483275 ATP2B2Q01814 1243 aa16.85■□□□□ 0.29
VARS-226ENST00000483275 SIRT2Q8IXJ6 389 aa16.85■□□□□ 0.29
VARS-226ENST00000483275 TDHQ8IZJ6 230 aa16.85■□□□□ 0.29
VARS-226ENST00000483275 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
VARS-226ENST00000483275 SENP6Q9GZR1 1112 aaPredicted RBP16.85■□□□□ 0.29
VARS-226ENST00000483275 DCP1AQ9NPI6 582 aaPredicted RBP16.85■□□□□ 0.29
VARS-226ENST00000483275 PLXNA1Q9UIW2 1896 aa16.84■□□□□ 0.29
VARS-226ENST00000483275 MBD4O95243 580 aa16.84■□□□□ 0.29
VARS-226ENST00000483275 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
VARS-226ENST00000483275 AKR1B1P15121 316 aa16.84■□□□□ 0.29
VARS-226ENST00000483275 ADORA2AP29274 412 aa16.84■□□□□ 0.29
VARS-226ENST00000483275 TTF1Q15361 905 aaPredicted RBP16.84■□□□□ 0.29
VARS-226ENST00000483275 LBX2Q6XYB7 198 aa16.84■□□□□ 0.29
VARS-226ENST00000483275 DDX20Q9UHI6 824 aaKnown RBP16.84■□□□□ 0.29
VARS-226ENST00000483275 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
VARS-226ENST00000483275 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
VARS-226ENST00000483275 PLS1Q14651 629 aa16.83■□□□□ 0.28
VARS-226ENST00000483275 CLASRPQ8N2M8 674 aaKnown RBP16.83■□□□□ 0.28
VARS-226ENST00000483275 BOLA2Q9H3K6 86 aa16.83■□□□□ 0.28
VARS-226ENST00000483275 EYSQ5T1H1 3165 aa16.83■□□□□ 0.28
VARS-226ENST00000483275 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 HOXC6P09630 235 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 CYBAP13498 195 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 ERCC3P19447 782 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 GJC2Q5T442 439 aaPredicted RBP16.82■□□□□ 0.28
VARS-226ENST00000483275 ATG4CQ96DT6 458 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 SPATC1LQ9H0A9 340 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 SMCHD1A6NHR9 2005 aa16.82■□□□□ 0.28
VARS-226ENST00000483275 COBLO75128 1261 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 FLOT1O75955 427 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 ICA1Q05084 483 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 COG2Q14746 738 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 LRIT3Q3SXY7 679 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 PRAMEF19Q5SWL8 479 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 TMEM179Q6ZVK1 233 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 DPP9Q86TI2 863 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 SIAH1Q8IUQ4 282 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
VARS-226ENST00000483275 DLL1O00548 723 aa16.8■□□□□ 0.28
VARS-226ENST00000483275 ADD2P35612 726 aa16.8■□□□□ 0.28
VARS-226ENST00000483275 RTP1P59025 263 aa16.8■□□□□ 0.28
VARS-226ENST00000483275 DIEXFQ68CQ4 756 aaKnown RBP16.8■□□□□ 0.28
VARS-226ENST00000483275 NCAPG2Q86XI2 1143 aa16.8■□□□□ 0.28
VARS-226ENST00000483275 ATP11BQ9Y2G3 1177 aa16.8■□□□□ 0.28
VARS-226ENST00000483275 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
VARS-226ENST00000483275 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
VARS-226ENST00000483275 IGHA2P01877 340 aa16.79■□□□□ 0.28
VARS-226ENST00000483275 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
VARS-226ENST00000483275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.79■□□□□ 0.28
VARS-226ENST00000483275 LPAR1Q92633 364 aa16.79■□□□□ 0.28
VARS-226ENST00000483275 ZBTB40Q9NUA8 1239 aa16.79■□□□□ 0.28
VARS-226ENST00000483275 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
VARS-226ENST00000483275 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 DNM1LO00429 736 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 RAD21O60216 631 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 DSG3P32926 999 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 STK11IPQ8N1F8 1099 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 ARHGEF10LQ9HCE6 1279 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
VARS-226ENST00000483275 MTMR10Q9NXD2 777 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
VARS-226ENST00000483275 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 USP17L21D6R901 530 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 HMMRO75330 724 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 PGK2P07205 417 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 CDK8P49336 464 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 TMEM132BQ14DG7 1078 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 OLFML2BQ68BL8 750 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 FERMT2Q96AC1 680 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
VARS-226ENST00000483275 LBHD1Q9BQE6 289 aaPredicted RBP16.77■□□□□ 0.28
VARS-226ENST00000483275 VCPKMTQ9H867 229 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 HOXC10Q9NYD6 342 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 TMX2Q9Y320 296 aa16.77■□□□□ 0.28
VARS-226ENST00000483275 MCM3APO60318 1980 aa16.77■□□□□ 0.27
VARS-226ENST00000483275 MSCO60682 206 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
VARS-226ENST00000483275 TRIM60Q495X7 471 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 C20orf194Q5TEA3 1177 aa16.76■□□□□ 0.27
VARS-226ENST00000483275 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms