RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 RAD21O60216 631 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 CTDNEP1O95476 244 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 RCAN1P53805 252 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 TTLL12Q14166 644 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-205ENST00000482968 ZNF408Q9H9D4 720 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 GPBP1L1Q9HC44 474 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-205ENST00000482968 SMC3Q9UQE7 1217 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 A0A1W2PRG0 241 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 ECE1P42892 770 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 SCYL3Q8IZE3 742 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
PHGDH-205ENST00000482968 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-205ENST00000482968 ACER1Q8TDN7 264 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 ARHGEF10LQ9HCE6 1279 aa17.53■□□□□ 0.4
PHGDH-205ENST00000482968 CCDC196A0A1B0GTZ2 297 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 JAK2O60674 1132 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 MAP3K9P80192 1104 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 MOB2Q70IA6 237 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 RASGRP2Q7LDG7 609 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.42e-7■■□□□ 13.6
PHGDH-205ENST00000482968 PICK1Q9NRD5 415 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 GINM1Q9NU53 330 aa17.52■□□□□ 0.4
PHGDH-205ENST00000482968 USP17L5A8MUK1 530 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 PPP2R5BQ15173 497 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 USP17L2Q6R6M4 530 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 LLPHQ9BRT6 129 aaKnown RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 PDHBP11177 359 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 GJB2P29033 226 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 KIF5BP33176 963 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 GRM4Q14833 912 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 NTRK3Q16288 839 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 MAP3K14Q99558 947 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
PHGDH-205ENST00000482968 MAD2L2Q9UI95 211 aa17.51■□□□□ 0.39
PHGDH-205ENST00000482968 NID2Q14112 1375 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 PTPDC1A2A3K4 754 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 F5H6K3 240 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 PLEKHA8P1O95397 391 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 PARP1P09874 1014 aaKnown RBP17.5■□□□□ 0.39
PHGDH-205ENST00000482968 PTPRAP18433 802 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 KLRC3Q07444 240 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 ZYXQ15942 572 aaKnown RBP17.5■□□□□ 0.39
PHGDH-205ENST00000482968 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 PHKBQ93100 1093 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 DOCK1Q14185 1865 aa17.5■□□□□ 0.39
PHGDH-205ENST00000482968 VGLL4Q14135 290 aa17.49■□□□□ 0.39
PHGDH-205ENST00000482968 SLFN13Q68D06 897 aa17.49■□□□□ 0.39
PHGDH-205ENST00000482968 ARMC9Q7Z3E5 817 aa17.49■□□□□ 0.39
PHGDH-205ENST00000482968 SMARCC2Q8TAQ2 1214 aa17.49■□□□□ 0.39
PHGDH-205ENST00000482968 CSADQ9Y600 493 aa17.49■□□□□ 0.39
PHGDH-205ENST00000482968 ZHX2Q9Y6X8 837 aa17.49■□□□□ 0.39
PHGDH-205ENST00000482968 FRMPD2Q68DX3 1309 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-205ENST00000482968 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-205ENST00000482968 CDKL5O76039 1030 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SPICE1Q8N0Z3 855 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SRBD1Q8N5C6 995 aaKnown RBP17.48■□□□□ 0.39
PHGDH-205ENST00000482968 FEZ1Q99689 392 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 ISY1Q9ULR0 285 aaKnown RBP17.48■□□□□ 0.39
PHGDH-205ENST00000482968 KLRF2D3W0D1 207 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SNHG28P0DPA3 235 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 IFNAR1P17181 557 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SLC1A4P43007 532 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SPP2Q13103 211 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 NBPF11Q86T75 865 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 GMCL1P1Q8NEA9 526 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 GOPCQ9HD26 462 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 GPCPD1Q9NPB8 672 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 SNCAIPQ9Y6H5 919 aa17.48■□□□□ 0.39
PHGDH-205ENST00000482968 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
PHGDH-205ENST00000482968 CELF2O95319 508 aaKnown RBP17.47■□□□□ 0.39
PHGDH-205ENST00000482968 NDUFB10O96000 172 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 FDPSP14324 419 aaKnown RBP17.47■□□□□ 0.39
PHGDH-205ENST00000482968 GNAQP50148 359 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 HMGN5P82970 282 aaKnown RBP17.47■□□□□ 0.39
PHGDH-205ENST00000482968 MAP3K11Q16584 847 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 KCTD1Q719H9 257 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 CLMNQ96JQ2 1002 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
PHGDH-205ENST00000482968 ORC3Q9UBD5 711 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms