RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 JAG2Q9Y219 1238 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 LRP6O75581 1613 aa14.04□□□□□ -0.16
CCDC78-213ENST00000482878 USP8P40818 1118 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
CCDC78-213ENST00000482878 SPATA20Q8TB22 786 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 NUP133Q8WUM0 1156 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 FAM204AQ9H8W3 233 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 NID2Q14112 1375 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 A0A087WUV0 522 aaPredicted RBP14.03□□□□□ -0.16
CCDC78-213ENST00000482878 FAM205CA6NFA0 338 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 SOWAHDA6NJG2 315 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 PDE8AO60658 829 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 DEXIO95424 95 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 RSRC2Q7L4I2 434 aaKnown RBP14.03□□□□□ -0.16
CCDC78-213ENST00000482878 TRIML1Q8N9V2 468 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 GIMAP7Q8NHV1 300 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 A0A087X0B3 334 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 A0A0U1RQJ8 604 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 H0YHG0 523 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 CASP1P29466 404 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 PLCD1P51178 756 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 APTXQ7Z2E3 356 aaKnown RBP14.03□□□□□ -0.16
CCDC78-213ENST00000482878 SUGP1Q8IWZ8 645 aaKnown RBP14.03□□□□□ -0.16
CCDC78-213ENST00000482878 STAG1Q8WVM7 1258 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 ECM29Q5VYK3 1845 aa14.03□□□□□ -0.16
CCDC78-213ENST00000482878 A0A1B0GTH6 734 aa14.02□□□□□ -0.16
CCDC78-213ENST00000482878 SLC4A9Q96Q91 983 aa14.02□□□□□ -0.16
CCDC78-213ENST00000482878 SLC4A4Q9Y6R1 1079 aa14.02□□□□□ -0.16
CCDC78-213ENST00000482878 MYO5AQ9Y4I1 1855 aaKnown RBP14.02□□□□□ -0.16
CCDC78-213ENST00000482878 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
CCDC78-213ENST00000482878 FANCBQ8NB91 859 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 AFMP43652 599 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 STX17P56962 302 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 MIGA1Q8NAN2 632 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 EPSTI1Q96J88 318 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 ABCB6Q9NP58 842 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 ZBTB1Q9Y2K1 713 aa14.02□□□□□ -0.17
CCDC78-213ENST00000482878 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
CCDC78-213ENST00000482878 ERCC5P28715 1186 aaPredicted RBP14.01□□□□□ -0.17
CCDC78-213ENST00000482878 PPP2R5AQ15172 486 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 EARS2Q5JPH6 523 aaKnown RBP14.01□□□□□ -0.17
CCDC78-213ENST00000482878 FBXW10Q5XX13 1052 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 SMIM22K7EJ46 135 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 PPFIA4O75335 1185 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 KANK3Q6NY19 840 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 RAD9BQ6WBX8 426 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 CEP89Q96ST8 783 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 LZTFL1Q9NQ48 299 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 MROH5Q6ZUA9 1318 aa14.01□□□□□ -0.17
CCDC78-213ENST00000482878 ERICH2A1L162 156 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
CCDC78-213ENST00000482878 RBL2Q08999 1139 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 SMYD4Q8IYR2 804 aaPredicted RBP14□□□□□ -0.17
CCDC78-213ENST00000482878 CCDC175P0C221 793 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 CYP19A1P11511 503 aaPredicted RBP14□□□□□ -0.17
CCDC78-213ENST00000482878 SLC5A1P13866 664 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
CCDC78-213ENST00000482878 CEP131Q9UPN4 1083 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 hCG_1642624A0A1W2PR95 340 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 WNT7AO00755 349 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 GBP6Q6ZN66 633 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 IGSF22Q8N9C0 903 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 AFAP1L1Q8TED9 768 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 PANX2Q96RD6 677 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 NACAP1Q9BZK3 213 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 VPS54Q9P1Q0 977 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 ADGRG1Q9Y653 693 aa14□□□□□ -0.17
CCDC78-213ENST00000482878 CCT5P48643 541 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 BCAMP50895 628 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 RPAINQ86UA6 219 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 FAM107BQ9H098 131 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 TOGARAM1Q9Y4F4 1720 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 MAP2K7O14733 419 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 CUL4BQ13620 913 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 KIF4BQ2VIQ3 1234 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 SWT1Q5T5J6 900 aaKnown RBP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 SPATA1Q5VX52 437 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 FAM71BQ8TC56 605 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 PAGE5Q96GU1 130 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 JPH2Q9BR39 696 aaPredicted RBP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 ADD3Q9UEY8 706 aaKnown RBP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 GOLGB1Q14789 3259 aaKnown RBP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 PRDM1O75626 825 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 RDXP35241 583 aaKnown RBP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 CASP8Q14790 479 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 AATFQ9NY61 560 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC78-213ENST00000482878 SHANK3Q9BYB0 1731 aa13.99□□□□□ -0.17
CCDC78-213ENST00000482878 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 KIF1CO43896 1103 aaKnown RBP13.98□□□□□ -0.17
CCDC78-213ENST00000482878 PBX1P40424 430 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 SATB1Q01826 763 aa13.98□□□□□ -0.17
CCDC78-213ENST00000482878 BEND6Q5SZJ8 279 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms